RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 C10orf113Q5VZT2 155 aa12.2□□□□□ -0.46
SHOX2-202ENST00000425436 C10orf99Q6UWK7 81 aa12.2□□□□□ -0.46
SHOX2-202ENST00000425436 TTC9CQ8N5M4 171 aa12.2□□□□□ -0.46
SHOX2-202ENST00000425436 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
SHOX2-202ENST00000425436 TMEM68Q96MH6 324 aa12.2□□□□□ -0.46
SHOX2-202ENST00000425436 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
SHOX2-202ENST00000425436 COLCA2A8K830 154 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 I3L2K1 104 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 ATP6V0E1O15342 81 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 ATF4P18848 351 aaPredicted RBP12.19□□□□□ -0.46
SHOX2-202ENST00000425436 PLP1P60201 277 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 MIR17HGQ75NE6 70 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 ZNF329Q86UD4 541 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 C11orf44Q8N8P7 122 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 PARLQ9H300 379 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 DOK5Q9P104 306 aa12.19□□□□□ -0.46
SHOX2-202ENST00000425436 TRAV30A0A087WSZ9 112 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 PSMB11A5LHX3 300 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 G3V318 75 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 AP4M1O00189 453 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 SCGB2A1O75556 95 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 OR2C1O95371 312 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
SHOX2-202ENST00000425436 GATA2P23769 480 aaPredicted RBP12.18□□□□□ -0.46
SHOX2-202ENST00000425436 SPATA31B1PQ5VZV4 182 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 S100A7AQ86SG5 101 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 WFDC12Q8WWY7 111 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 TMEM37Q8WXS4 190 aa12.18□□□□□ -0.46
SHOX2-202ENST00000425436 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
SHOX2-202ENST00000425436 HYPMO75409 117 aa12.17□□□□□ -0.46
SHOX2-202ENST00000425436 FOLR2P14207 255 aa12.17□□□□□ -0.46
SHOX2-202ENST00000425436 HIST1H1BP16401 226 aaKnown RBP12.17□□□□□ -0.46
SHOX2-202ENST00000425436 UBE2G2P60604 165 aa12.17□□□□□ -0.46
SHOX2-202ENST00000425436 OR5AU1Q8NGC0 362 aa12.17□□□□□ -0.46
SHOX2-202ENST00000425436 RPUSD4Q96CM3 377 aaKnown RBP12.17□□□□□ -0.46
SHOX2-202ENST00000425436 OR7C2O60412 319 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 IGF1P05019 195 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 APELAP0DMC3 54 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 AKR1C3P42330 323 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 ZNF90Q03938 601 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 ECSCRQ19T08 205 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 ZNF674Q2M3X9 581 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 TMEM190Q8WZ59 177 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 CD28P10747 220 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 OR51G1Q8NGK1 321 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 WIPF2Q8TF74 440 aaPredicted RBP12.16□□□□□ -0.46
SHOX2-202ENST00000425436 TCEAL7Q9BRU2 100 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 ZNF747Q9BV97 191 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 MRPL36Q9P0J6 103 aaKnown RBP12.16□□□□□ -0.46
SHOX2-202ENST00000425436 DMRT1Q9Y5R6 373 aa12.16□□□□□ -0.46
SHOX2-202ENST00000425436 TRAV41A0A0B4J266 112 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 K7EIM0 57 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 IGLC1P0CG04 106 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 ATP5G3P48201 142 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 MFAP4P55083 255 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 SGMS2Q8NHU3 365 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 C11orf52Q96A22 123 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 ANAPC16Q96DE5 110 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 MLXQ9UH92 298 aa12.15□□□□□ -0.46
SHOX2-202ENST00000425436 IGLV11-55A0A075B6I3 123 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 NDUFB4O95168 129 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 IGHV3-48P01763 117 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
SHOX2-202ENST00000425436 KLK9Q2XQG4 91 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 UNQ5815/PRO19632Q6UWF5 114 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 PATE2Q6UY27 113 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 LINC00305Q7Z4B0 112 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 HIST1H2BAQ96A08 127 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 FAM167A-AS1Q96KT0 104 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 TXN2Q99757 166 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 PAXXQ9BUH6 204 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 SLC25A2Q9BXI2 301 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 OR51M1Q9H341 326 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 KLK9Q9UKQ9 250 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 YTHDF2Q9Y5A9 579 aaKnown RBP12.14□□□□□ -0.47
SHOX2-202ENST00000425436 LY96Q9Y6Y9 160 aa12.14□□□□□ -0.47
SHOX2-202ENST00000425436 RD3LP0DJH9 198 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 ORM2P19652 201 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 NPPCP23582 126 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 RPL23P62829 140 aaKnown RBP12.13□□□□□ -0.47
SHOX2-202ENST00000425436 SLC35B1P78383 322 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 ADIRFQ15847 76 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 TCTEX1D4Q5JR98 221 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 OR1B1Q8NGR6 318 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 SPATA3Q8NHX4 192 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 CITED1Q99966 193 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 RNF24Q9Y225 148 aa12.13□□□□□ -0.47
SHOX2-202ENST00000425436 PPP1R2P9O14990 202 aa12.12□□□□□ -0.47
SHOX2-202ENST00000425436 PPIFP30405 207 aaKnown RBP12.12□□□□□ -0.47
SHOX2-202ENST00000425436 S100A7P31151 101 aa12.12□□□□□ -0.47
SHOX2-202ENST00000425436 YPEL3P61236 119 aaPredicted RBP12.12□□□□□ -0.47
SHOX2-202ENST00000425436 UBE2L3P68036 154 aaKnown RBP12.12□□□□□ -0.47
SHOX2-202ENST00000425436 CFHR3Q02985 330 aa12.12□□□□□ -0.47
SHOX2-202ENST00000425436 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
SHOX2-202ENST00000425436 FAM24BQ8N5W8 94 aa12.12□□□□□ -0.47
SHOX2-202ENST00000425436 ZNF503Q96F45 646 aa12.12□□□□□ -0.47
SHOX2-202ENST00000425436 FANCD2OSQ96PS1 177 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 323.1 ms