RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PTTG1IPP53801 180 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 RANP62826 216 aaKnown RBP8.55□□□□□ -1.04
CUX1-205ENST00000425244 GNG5P63218 68 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 PRR27Q6MZM9 219 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 FAM71F2Q6NXP2 309 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 IGF2BP2-AS1Q96M15 143 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 RNF2Q99496 336 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 OSTCQ9NRP0 149 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 TNFRSF19Q9NS68 423 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 NAGKQ9UJ70 344 aa8.55□□□□□ -1.04
CUX1-205ENST00000425244 IGLV2-8P01709 118 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 C11orf71Q6IPW1 123 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 C11orf42Q8N5U0 333 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 NRGNQ92686 78 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 IGLC7A0M8Q6 106 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 C20orf202A1L168 122 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 H3BTX0 84 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 RPL27AP46776 148 aaKnown RBP8.54□□□□□ -1.04
CUX1-205ENST00000425244 LINC00310P59036 64 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 TPPP2P59282 170 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 HSPB9Q9BQS6 159 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 FAM103A1Q9BTL3 118 aaKnown RBP8.54□□□□□ -1.04
CUX1-205ENST00000425244 CSTL1Q9H114 145 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 KAAG1Q9UBP8 84 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 INSIG2Q9Y5U4 225 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 GCN1Q92616 2671 aaKnown RBP8.54□□□□□ -1.04
CUX1-205ENST00000425244 WNK2Q9Y3S1 2297 aa8.54□□□□□ -1.04
CUX1-205ENST00000425244 IGHV2-26A0A0B4J1V2 119 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 KIR2DL5BA0A0G2JN68 375 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 KIR2DL5BA0A0G2JPC4 375 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 C22orf46C9J442 243 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 PEX7O00628 323 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 ISLRO14498 428 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 LGALS7P47929 136 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 CX3CL1P78423 397 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 RPL19P84098 196 aaKnown RBP8.53□□□□□ -1.04
CUX1-205ENST00000425244 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 ZNF329Q86UD4 541 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 KIR2DL5AQ8N109 375 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 C8orf31Q8N9H6 132 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 ZNF596Q8TC21 504 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 FAM168AQ92567 244 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 TBX15Q96SF7 602 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 PTPN13Q12923 2485 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 CCL25O15444 150 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 MFAP2P55001 183 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 MRGPRG-AS1Q2M3A8 158 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 Q6ZWC4 215 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 GNB4Q9HAV0 340 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
CUX1-205ENST00000425244 ZNF137PP52743 207 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 FXYD5Q96DB9 178 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 GNB1LQ9BYB4 327 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 POLR3KQ9Y2Y1 108 aaPredicted RBP8.52□□□□□ -1.05
CUX1-205ENST00000425244 PRRX1P54821 245 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 PLGLAQ15195 96 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 ZNF705AQ6ZN79 300 aaPredicted RBP8.52□□□□□ -1.05
CUX1-205ENST00000425244 TMEM136Q6ZRR5 245 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 DTX2Q86UW9 622 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 THAP8Q8NA92 274 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 RNF24Q9Y225 148 aa8.52□□□□□ -1.05
CUX1-205ENST00000425244 TRBV9A0A0B4J1U6 114 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 IGHV1-3A0A0C4DH29 117 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 ANKRD17O75179 2603 aaKnown RBP8.51□□□□□ -1.05
CUX1-205ENST00000425244 SLC25A5P05141 298 aaKnown RBP8.51□□□□□ -1.05
CUX1-205ENST00000425244 RPEQ96AT9 228 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 PERPQ96FX8 193 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 ALKBH7Q9BT30 221 aaPredicted RBP8.51□□□□□ -1.05
CUX1-205ENST00000425244 FBXL15Q9H469 300 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 ONECUT1Q9UBC0 465 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 AMY1AP04745 511 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 SRIP30626 198 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 UBE2G1P62253 170 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 PAFAH1B2P68402 229 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 PRR31Q5SQ13 230 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 TEX45Q8NA69 505 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 IGFBPL1Q8WX77 278 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 CLEC7AQ9BXN2 247 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 SIGLEC9Q9Y336 463 aa8.51□□□□□ -1.05
CUX1-205ENST00000425244 PPIAL4CA0A0B4J2A2 164 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 PGPA6NDG6 321 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 MT-ND6P03923 174 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 PPIAL4GP0DN37 164 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 PMCHP20382 165 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 SIGLECL1Q8N7X8 197 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 TIMD4Q96H15 378 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 VPS25Q9BRG1 176 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 ZNF331Q9NQX6 463 aaPredicted RBP8.5□□□□□ -1.05
CUX1-205ENST00000425244 SMIM27A0A1W2PRY6 76 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 BUB1B-PAK6H3BSN5 160 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 ZNF253O75346 499 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 HYPMO75409 117 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 TOX4O94842 621 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 FSTL3O95633 263 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 COMPP49747 757 aaPredicted RBP8.5□□□□□ -1.05
CUX1-205ENST00000425244 KRTDAPP60985 99 aa8.5□□□□□ -1.05
CUX1-205ENST00000425244 COL5A1-AS1Q5SY13 56 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms