RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 BVES-AS1Q5T3Y7 98 aa12.15□□□□□ -0.46
C9orf3-204ENST00000424143 Q6ZS92 163 aa12.15□□□□□ -0.46
C9orf3-204ENST00000424143 ARL6IP6Q8N6S5 226 aa12.15□□□□□ -0.46
C9orf3-204ENST00000424143 TMEM75Q8N9X5 138 aa12.15□□□□□ -0.46
C9orf3-204ENST00000424143 PGLYRP4Q96LB8 373 aa12.15□□□□□ -0.46
C9orf3-204ENST00000424143 F11RQ9Y624 299 aaKnown RBP12.15□□□□□ -0.46
C9orf3-204ENST00000424143 VSTM5A8MXK1 200 aa12.15□□□□□ -0.47
C9orf3-204ENST00000424143 SLC25A17O43808 307 aa12.15□□□□□ -0.47
C9orf3-204ENST00000424143 FCN3O75636 299 aa12.15□□□□□ -0.47
C9orf3-204ENST00000424143 IGLV2-11P01706 119 aa12.15□□□□□ -0.47
C9orf3-204ENST00000424143 WT1P19544 449 aaPredicted RBP12.15□□□□□ -0.47
C9orf3-204ENST00000424143 HIST1H1AQ02539 215 aaPredicted RBP12.15□□□□□ -0.47
C9orf3-204ENST00000424143 BLNKQ8WV28 456 aa12.15□□□□□ -0.47
C9orf3-204ENST00000424143 NEU4Q8WWR8 484 aaPredicted RBP12.15□□□□□ -0.47
C9orf3-204ENST00000424143 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
C9orf3-204ENST00000424143 TAX1BP3O14907 124 aa12.14□□□□□ -0.47
C9orf3-204ENST00000424143 ADIPOQQ15848 244 aa12.14□□□□□ -0.47
C9orf3-204ENST00000424143 DEFB123Q8N688 67 aa12.14□□□□□ -0.47
C9orf3-204ENST00000424143 RNASE8Q8TDE3 154 aaKnown RBP12.14□□□□□ -0.47
C9orf3-204ENST00000424143 ZNF835Q9Y2P0 537 aa12.14□□□□□ -0.47
C9orf3-204ENST00000424143 CADP27708 2225 aa12.13□□□□□ -0.47
C9orf3-204ENST00000424143 PPBPP02775 128 aa12.13□□□□□ -0.47
C9orf3-204ENST00000424143 COL8A1P27658 744 aa12.13□□□□□ -0.47
C9orf3-204ENST00000424143 LOXP28300 417 aaPredicted RBP12.13□□□□□ -0.47
C9orf3-204ENST00000424143 ZNF493Q6ZR52 646 aa12.13□□□□□ -0.47
C9orf3-204ENST00000424143 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
C9orf3-204ENST00000424143 NPFFR1Q9GZQ6 430 aa12.13□□□□□ -0.47
C9orf3-204ENST00000424143 SIGLEC9Q9Y336 463 aa12.13□□□□□ -0.47
C9orf3-204ENST00000424143 TOX4O94842 621 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 RBP4P02753 201 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 THBDP07204 575 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 IGHV1-8P0DP01 117 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 DEFB109BQ30KR1 87 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 S100A7AQ86SG5 101 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 OR4C5Q8NGB2 326 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 SCNM1Q9BWG6 230 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 TMEM133Q9H2Q1 129 aa12.12□□□□□ -0.47
C9orf3-204ENST00000424143 SERTM2A0A1B0GWG4 89 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 K7EM74 188 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 K7EQM0 130 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 PLAUP00749 431 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 FAM87AP0C7U9 286 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 COX8AP10176 69 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 CSN1S1P47710 185 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 DIAPH2-AS1Q14236 149 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 MPV17L2Q567V2 206 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 PSMG4Q5JS54 123 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 COX8CQ7Z4L0 72 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 OR1N2Q8NGR9 330 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 SLC25A39Q9BZJ4 359 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-204ENST00000424143 FBLL1A6NHQ2 334 aaKnown RBP12.11□□□□□ -0.47
C9orf3-204ENST00000424143 TEX22C9J3V5 150 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 NUDT3O95989 172 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 SEC11AP67812 179 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 CCL8P80075 99 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 FAM27E3Q08E93 113 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 SRSF6Q13247 344 aaKnown RBP12.11□□□□□ -0.47
C9orf3-204ENST00000424143 ALKBH2Q6NS38 261 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 SHANK2-AS3Q9BTD1 123 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 ZNF747Q9BV97 191 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 TPSG1Q9NRR2 321 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 U3KQK5 164 aa12.11□□□□□ -0.47
C9orf3-204ENST00000424143 SH2D7A6NKC9 451 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-204ENST00000424143 C16orf97H3BN30 126 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 I3L2K1 104 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 IGLV1-47P01700 117 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 PSG1P11464 419 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 VAMP3Q15836 100 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 LINC00173Q6ZV60 143 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 OR10AG1Q8NH19 301 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 AP5S1Q9NUS5 200 aa12.1□□□□□ -0.47
C9orf3-204ENST00000424143 TRBV19A0A075B6N1 114 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 ZNF785A8K8V0 405 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 HTR1DP28221 377 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 HCP5Q6MZN7 132 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 BPIFA4PQ86YQ2 179 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 RPRMLQ8N4K4 120 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 RITA1Q96K30 269 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 NGBQ9NPG2 151 aa12.09□□□□□ -0.47
C9orf3-204ENST00000424143 hDV102S1A0JD36 115 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 H3BRN7 92 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 FTH1P19P0C7X4 201 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 PDE6HQ13956 83 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 RUSC1-AS1Q66K80 236 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 CTSZQ9UBR2 303 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 URB1O60287 2271 aaKnown RBP12.08□□□□□ -0.48
C9orf3-204ENST00000424143 GPR179Q6PRD1 2367 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 SIVA1O15304 175 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 GPR183P32249 361 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 LYPD2Q6UXB3 125 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 CIARTQ8N365 385 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-204ENST00000424143 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-204ENST00000424143 JKAMPQ9P055 326 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 PEF1Q9UBV8 284 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms