RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RNF114Q9Y508 228 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 A1L4Q6 167 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF705FA8MVS1 300 aaPredicted RBP9.45□□□□□ -0.9
PTPRN-204ENST00000423636 G3V318 75 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 HYPMO75409 117 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 AMY1AP04745 511 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF705DP0CH99 300 aaPredicted RBP9.45□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF705BP0CI00 300 aaPredicted RBP9.45□□□□□ -0.9
PTPRN-204ENST00000423636 FOXA3P55318 350 aaPredicted RBP9.45□□□□□ -0.9
PTPRN-204ENST00000423636 RPL15P61313 204 aaKnown RBP9.45□□□□□ -0.9
PTPRN-204ENST00000423636 CX3CL1P78423 397 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 PMCHL1Q16048 86 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 RPEL1Q2QD12 228 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 LCNL1Q6ZST4 164 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF329Q86UD4 541 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 RCHY1Q96PM5 261 aa9.45□□□□□ -0.9
PTPRN-204ENST00000423636 HLA-DMBP28068 263 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 UBE2G1P62253 170 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF600Q6ZNG1 722 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 ATOH7Q8N100 152 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 PRDM13Q9H4Q3 707 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 Q56UQ5 140 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 OR2D3Q8NGH3 330 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF596Q8TC21 504 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 PYGO2Q9BRQ0 406 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 GNB4Q9HAV0 340 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 CHD6Q8TD26 2715 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 PEX7O00628 323 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 SRP14P37108 136 aaKnown RBP9.44□□□□□ -0.9
PTPRN-204ENST00000423636 LY6EQ16553 131 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 LINC00311Q8N616 119 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 OR5R1Q8NH85 324 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 IL36BQ9NZH7 164 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 TP53TG3Q9ULZ0 132 aa9.44□□□□□ -0.9
PTPRN-204ENST00000423636 F11RQ9Y624 299 aaKnown RBP9.44□□□□□ -0.9
PTPRN-204ENST00000423636 IGKV3-7A0A075B6H7 116 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 BPIFB3P59826 476 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 NOL4LQ96MY1 436 aaPredicted RBP9.43□□□□□ -0.9
PTPRN-204ENST00000423636 NBR2O15453 112 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 IGKV1-17P01599 117 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 CRISP2P16562 243 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 NUDT10Q8NFP7 164 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 CACNG8Q8WXS5 425 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 NUDT11Q96G61 164 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 HSPB9Q9BQS6 159 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 MCRIP2Q9BUT9 160 aaKnown RBP9.43□□□□□ -0.9
PTPRN-204ENST00000423636 Q9H3A6 140 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 SRIP30626 198 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 TCEAL7Q9BRU2 100 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 SAMD10Q9BYL1 202 aa9.43□□□□□ -0.9
PTPRN-204ENST00000423636 VWC2LB2RUY7 222 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 H0Y8G0 127 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 GNG7O60262 68 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 GPX4P36969 197 aaPredicted RBP9.42□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF138P52744 262 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 SLAQ13239 276 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 HIST2H2BDQ6DRA6 164 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 TEX45Q8NA69 505 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 RNASEH2CQ8TDP1 164 aaKnown RBP9.42□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF586Q9NXT0 402 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 IGLC1P0CG04 106 aa9.42□□□□□ -0.9
PTPRN-204ENST00000423636 A0A087X0M5 115 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 A0A1B0GX30 115 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 K7EIM0 57 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 NDUFB8O95169 186 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 FSTL3O95633 263 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 CRYGBP07316 175 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 KRTDAPP60985 99 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 TMEM68Q96MH6 324 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 SLC25A39Q9BZJ4 359 aaPredicted RBP9.41□□□□□ -0.9
PTPRN-204ENST00000423636 HIGD1AQ9Y241 93 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 UCNP55089 124 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 LINC00310P59036 64 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF664Q8N3J9 261 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 HIGD1CA8MV81 97 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 J3KRW8 73 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 C11orf71Q6IPW1 123 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 OR1L4Q8NGR5 311 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 VN1R17PQ8TDU5 208 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 ITLN2Q8WWU7 325 aaPredicted RBP9.41□□□□□ -0.9
PTPRN-204ENST00000423636 TNFRSF14Q92956 283 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 PERPQ96FX8 193 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 CHODLQ9H9P2 273 aa9.41□□□□□ -0.9
PTPRN-204ENST00000423636 I3L2K1 104 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 GATCO43716 136 aaKnown RBP9.4□□□□□ -0.9
PTPRN-204ENST00000423636 SAA4P35542 130 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 Q8TAT8 98 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 CMTM2Q8TAZ6 248 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 CFHR4Q92496 578 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 IGF2BP2-AS1Q96M15 143 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 LY6LH3BQJ8 138 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 ZNF253O75346 499 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 CSN3P07498 182 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 COL8A1P27658 744 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 TCTAP57738 103 aa9.4□□□□□ -0.9
PTPRN-204ENST00000423636 DEFA6Q01524 100 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms