RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 LOXL1Q08397 574 aaPredicted RBP13.38□□□□□ -0.27
PKP4-204ENST00000421462 Q9H3A6 140 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 COX8AP10176 69 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 TMEM11P17152 192 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 C9orf106Q8NAJ2 232 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 OR1N2Q8NGR9 330 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 ZNF714Q96N38 554 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 WNK2Q9Y3S1 2297 aa13.38□□□□□ -0.27
PKP4-204ENST00000421462 TPSG1Q9NRR2 321 aa13.37□□□□□ -0.27
PKP4-204ENST00000421462 IGKV1D-37A0A075B6S9 117 aa13.37□□□□□ -0.27
PKP4-204ENST00000421462 A0A1W2PNU3 283 aaPredicted RBP13.37□□□□□ -0.27
PKP4-204ENST00000421462 SLC25A17O43808 307 aa13.37□□□□□ -0.27
PKP4-204ENST00000421462 KIR2DL2P43627 348 aaPredicted RBP13.37□□□□□ -0.27
PKP4-204ENST00000421462 GTF2H5Q6ZYL4 71 aa13.37□□□□□ -0.27
PKP4-204ENST00000421462 NEU4Q8WWR8 484 aaPredicted RBP13.37□□□□□ -0.27
PKP4-204ENST00000421462 TMEM164Q5U3C3 297 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 CLEC2AQ6UVW9 174 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 ZCCHC24Q8N2G6 241 aaKnown RBP13.36□□□□□ -0.27
PKP4-204ENST00000421462 MDS2Q8NDY4 140 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 NDUFA4L2Q9NRX3 87 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 ADGRG4Q8IZF6 3080 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 GNG7O60262 68 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 CFHR2P36980 270 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 IFI27P40305 119 aaPredicted RBP13.36□□□□□ -0.27
PKP4-204ENST00000421462 S100A7AQ86SG5 101 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 CACNG8Q8WXS5 425 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 TCRAP04437 139 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 CGB3P0DN86 165 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 CGB7P0DN87 165 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 KIR3DS1Q14943 382 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 C5orf17Q8NAS9 161 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 OR10AG1Q8NH19 301 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 PERPQ96FX8 193 aa13.36□□□□□ -0.27
PKP4-204ENST00000421462 C22orf46C9J442 243 aa13.35□□□□□ -0.27
PKP4-204ENST00000421462 LYZP61626 148 aa13.35□□□□□ -0.27
PKP4-204ENST00000421462 MS4A6AQ9H2W1 248 aa13.35□□□□□ -0.27
PKP4-204ENST00000421462 A0A0G2JLM5 398 aa13.35□□□□□ -0.27
PKP4-204ENST00000421462 ZNF207O43670 478 aaKnown RBP13.35□□□□□ -0.27
PKP4-204ENST00000421462 CACNG7P62955 275 aa13.35□□□□□ -0.27
PKP4-204ENST00000421462 ZNF747Q9BV97 191 aa13.35□□□□□ -0.27
PKP4-204ENST00000421462 TMEM265A0A087WTH1 108 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 K7EMI3 77 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 LINC01545Q5VT33 79 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.34□□□□□ -0.27
PKP4-204ENST00000421462 OR2K2Q8NGT1 345 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 MLST8Q9BVC4 326 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 SP9P0CG40 484 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 MZT1Q08AG7 82 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 POU2AF1Q16633 256 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 OR10X1Q8NGY0 326 aa13.34□□□□□ -0.27
PKP4-204ENST00000421462 CSN1S1P47710 185 aa13.33□□□□□ -0.27
PKP4-204ENST00000421462 PAX2Q02962 417 aa13.33□□□□□ -0.27
PKP4-204ENST00000421462 C1orf185Q5T7R7 199 aa13.33□□□□□ -0.27
PKP4-204ENST00000421462 OR4A5Q8NH83 315 aa13.33□□□□□ -0.27
PKP4-204ENST00000421462 RITA1Q96K30 269 aa13.33□□□□□ -0.27
PKP4-204ENST00000421462 NDFIP1Q9BT67 221 aa13.33□□□□□ -0.27
PKP4-204ENST00000421462 PRSS22Q9GZN4 317 aa13.33□□□□□ -0.27
PKP4-204ENST00000421462 DLX1P56177 255 aa13.33□□□□□ -0.28
PKP4-204ENST00000421462 CCL8P80075 99 aa13.33□□□□□ -0.28
PKP4-204ENST00000421462 SPCS1Q9Y6A9 102 aa13.33□□□□□ -0.28
PKP4-204ENST00000421462 CCL11P51671 97 aa13.33□□□□□ -0.28
PKP4-204ENST00000421462 SUB1P53999 127 aaKnown RBP eCLIP13.33□□□□□ -0.28
PKP4-204ENST00000421462 PLP1P60201 277 aa13.33□□□□□ -0.28
PKP4-204ENST00000421462 MEF2CQ06413 473 aaPredicted RBP13.33□□□□□ -0.28
PKP4-204ENST00000421462 CR1LQ2VPA4 569 aa13.33□□□□□ -0.28
PKP4-204ENST00000421462 PCP2Q8IVA1 136 aa13.33□□□□□ -0.28
PKP4-204ENST00000421462 ATMQ13315 3056 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 A0A1B0GUT8 65 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 C19orf71A6NCJ1 209 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 A6NDN8 102 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 MYCNOSP40205 109 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 RPS20P60866 119 aaKnown RBP13.32□□□□□ -0.28
PKP4-204ENST00000421462 EP300Q09472 2414 aaPredicted RBP13.32□□□□□ -0.28
PKP4-204ENST00000421462 SLC25A48Q6ZT89 311 aaKnown RBP13.32□□□□□ -0.28
PKP4-204ENST00000421462 RAI1Q7Z5J4 1906 aaPredicted RBP13.32□□□□□ -0.28
PKP4-204ENST00000421462 C18orf15Q96N68 181 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 RPUSD1Q9UJJ7 312 aaKnown RBP13.32□□□□□ -0.28
PKP4-204ENST00000421462 MGAQ8IWI9 3026 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 C9orf118A6NHY6 69 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 CGB1A6NKQ9 187 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 FSTL3O95633 263 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 MBNL2Q5VZF2 373 aaKnown RBP13.32□□□□□ -0.28
PKP4-204ENST00000421462 GUCD1Q96NT3 240 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 C1RLQ9NZP8 487 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 CACNA1BQ00975 2339 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 ZZEF1O43149 2961 aa13.32□□□□□ -0.28
PKP4-204ENST00000421462 LTAP01374 205 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 SEC11AP67812 179 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 TNFAIP6P98066 277 aaPredicted RBP13.31□□□□□ -0.28
PKP4-204ENST00000421462 TDHQ8IZJ6 230 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 FMC1Q96HJ9 113 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 RNF7Q9UBF6 113 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 A0A1W2PPI3 338 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 C17orf77Q96MU5 243 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 A1L4Q6 167 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 TMEM178AQ8NBL3 297 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 GAFA1Q96PS6 74 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 RAB9BQ9NP90 201 aa13.31□□□□□ -0.28
PKP4-204ENST00000421462 DMXL1Q9Y485 3027 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms