RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 BPIFCQ8NFQ6 507 aa15.44■□□□□ 0.06
PTPN4-202ENST00000420482 MAGT1Q9H0U3 335 aa15.44■□□□□ 0.06
PTPN4-202ENST00000420482 SLC45A2Q9UMX9 530 aa15.44■□□□□ 0.06
PTPN4-202ENST00000420482 CENPXA8MT69 81 aa15.43■□□□□ 0.06
PTPN4-202ENST00000420482 ISLRO14498 428 aa15.43■□□□□ 0.06
PTPN4-202ENST00000420482 IFNA21P01568 189 aa15.43■□□□□ 0.06
PTPN4-202ENST00000420482 AKR1C1Q04828 323 aa15.43■□□□□ 0.06
PTPN4-202ENST00000420482 EBLN2Q6P2I7 272 aa15.43■□□□□ 0.06
PTPN4-202ENST00000420482 RPP25LQ8N5L8 163 aaKnown RBP15.43■□□□□ 0.06
PTPN4-202ENST00000420482 SAV1Q9H4B6 383 aaPredicted RBP15.43■□□□□ 0.06
PTPN4-202ENST00000420482 CLUHP3Q96NS8 147 aa15.42■□□□□ 0.06
PTPN4-202ENST00000420482 GPR82Q96P67 336 aa15.42■□□□□ 0.06
PTPN4-202ENST00000420482 WDR12Q9GZL7 423 aaKnown RBP15.42■□□□□ 0.06
PTPN4-202ENST00000420482 SRRQ9GZT4 340 aa15.42■□□□□ 0.06
PTPN4-202ENST00000420482 ELOA3CA0A087WX78 387 aaPredicted RBP15.41■□□□□ 0.06
PTPN4-202ENST00000420482 C9orf170A2RU37 121 aa15.41■□□□□ 0.06
PTPN4-202ENST00000420482 TMEM189A5PLL7 270 aa15.41■□□□□ 0.06
PTPN4-202ENST00000420482 SMIM9A6NGZ8 99 aa15.41■□□□□ 0.06
PTPN4-202ENST00000420482 DEDDO75618 318 aa15.41■□□□□ 0.06
PTPN4-202ENST00000420482 Q6ZTC4 211 aa15.41■□□□□ 0.06
PTPN4-202ENST00000420482 OR4B1Q8NGF8 309 aa15.41■□□□□ 0.06
PTPN4-202ENST00000420482 RPRMQ9NS64 109 aa15.41■□□□□ 0.06
PTPN4-202ENST00000420482 IGKV1OR2-108A0A075B7D4 117 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 NDUFB6O95139 128 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 IGKV3-20P01619 116 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 S100A7AQ86SG5 101 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 C16orf92Q96LL3 132 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 NEU1Q99519 415 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 TMEM147Q9BVK8 224 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 RBM38Q9H0Z9 239 aaKnown RBP15.4■□□□□ 0.06
PTPN4-202ENST00000420482 SLC25A22Q9H936 323 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 APLNQ9ULZ1 77 aa15.4■□□□□ 0.06
PTPN4-202ENST00000420482 ORM2P19652 201 aa15.39■□□□□ 0.05
PTPN4-202ENST00000420482 OR4D5Q8NGN0 318 aa15.39■□□□□ 0.05
PTPN4-202ENST00000420482 OR1B1Q8NGR6 318 aa15.39■□□□□ 0.05
PTPN4-202ENST00000420482 RNF126Q9BV68 326 aa15.39■□□□□ 0.05
PTPN4-202ENST00000420482 DNAH10Q8IVF4 4471 aa15.39■□□□□ 0.05
PTPN4-202ENST00000420482 TEX48A0A1B0GUV7 120 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 SMCO3A2RU48 225 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 PRSS46E5RG02 174 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 H3BP45 60 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 SOCS3O14543 225 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 PAX9P55771 341 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 ID3Q02535 119 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 CNPY1Q3B7I2 92 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 GDF5OSQ5U4N7 250 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 ZNF705AQ6ZN79 300 aaPredicted RBP15.38■□□□□ 0.05
PTPN4-202ENST00000420482 ACOT7LQ6ZUV0 252 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 C7orf50Q9BRJ6 194 aaKnown RBP15.38■□□□□ 0.05
PTPN4-202ENST00000420482 KRTAP17-1Q9BYP8 105 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 PSENENQ9NZ42 101 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 GOLT1BQ9Y3E0 138 aa15.38■□□□□ 0.05
PTPN4-202ENST00000420482 IGHV4-4A0A075B6R2 117 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 DEFB131BA0A096LNP1 70 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 ZNF98A6NK75 572 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 ADAP1O75689 374 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 OR4E1P0C645 316 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 SPART-AS1P0CW21 52 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 PSG9Q00887 426 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 C4orf46Q504U0 113 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 TMEM144Q7Z5S9 345 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 RFNGQ9Y644 331 aa15.37■□□□□ 0.05
PTPN4-202ENST00000420482 IGHV3OR16-12A0A075B7B8 117 aa15.36■□□□□ 0.05
PTPN4-202ENST00000420482 ZNF705FA8MVS1 300 aaPredicted RBP15.36■□□□□ 0.05
PTPN4-202ENST00000420482 IL5P05113 134 aa15.36■□□□□ 0.05
PTPN4-202ENST00000420482 ZNF705DP0CH99 300 aaPredicted RBP15.36■□□□□ 0.05
PTPN4-202ENST00000420482 ZNF705BP0CI00 300 aaPredicted RBP15.36■□□□□ 0.05
PTPN4-202ENST00000420482 RAP2BP61225 183 aa15.36■□□□□ 0.05
PTPN4-202ENST00000420482 POLR2GP62487 172 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTPN4-202ENST00000420482 BAK1Q16611 211 aa15.36■□□□□ 0.05
PTPN4-202ENST00000420482 RSG1Q9BU20 258 aa15.36■□□□□ 0.05
PTPN4-202ENST00000420482 SLC25A32Q9H2D1 315 aa15.36■□□□□ 0.05
PTPN4-202ENST00000420482 RNF24Q9Y225 148 aa15.36■□□□□ 0.05
PTPN4-202ENST00000420482 SSSCA1O60232 199 aa15.35■□□□□ 0.05
PTPN4-202ENST00000420482 FXYD7P58549 80 aa15.35■□□□□ 0.05
PTPN4-202ENST00000420482 SELENOTP62341 195 aa15.35■□□□□ 0.05
PTPN4-202ENST00000420482 C12orf74Q32Q52 190 aa15.35■□□□□ 0.05
PTPN4-202ENST00000420482 FAM78BQ5VT40 261 aa15.35■□□□□ 0.05
PTPN4-202ENST00000420482 CELA1Q9UNI1 258 aa15.35■□□□□ 0.05
PTPN4-202ENST00000420482 A0A0J9YX75 114 aa15.34■□□□□ 0.05
PTPN4-202ENST00000420482 LINC00854A0A1B0GVQ3 168 aa15.34■□□□□ 0.05
PTPN4-202ENST00000420482 SMIM8Q96KF7 97 aa15.34■□□□□ 0.05
PTPN4-202ENST00000420482 NDUFAF3Q9BU61 184 aa15.34■□□□□ 0.05
PTPN4-202ENST00000420482 DOK5Q9P104 306 aa15.34■□□□□ 0.05
PTPN4-202ENST00000420482 FLVCR2Q9UPI3 526 aa15.34■□□□□ 0.05
PTPN4-202ENST00000420482 DUSP14O95147 198 aaKnown RBP15.33■□□□□ 0.04
PTPN4-202ENST00000420482 HBE1P02100 147 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 AMBPP02760 352 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 GATA2P23769 480 aaPredicted RBP15.33■□□□□ 0.04
PTPN4-202ENST00000420482 EMP1P54849 157 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 DEFB1P60022 68 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 CYP2G1PQ6ZSU1 146 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 ZNF709Q8N972 641 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 MGAT4CQ9UBM8 478 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 HIGD1AQ9Y241 93 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 HERC2O95714 4834 aa15.33■□□□□ 0.04
PTPN4-202ENST00000420482 FNDC10F2Z333 226 aa15.32■□□□□ 0.04
PTPN4-202ENST00000420482 HYPMO75409 117 aa15.32■□□□□ 0.04
PTPN4-202ENST00000420482 SCGB1D2O95969 90 aa15.32■□□□□ 0.04
PTPN4-202ENST00000420482 RPL7P18124 248 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms