RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 RD3LP0DJH9 198 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 RHOGP84095 191 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 KRTAP1-1Q07627 177 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 C9orf152Q5JTZ5 239 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 Q6YL49 198 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 PRDM13Q9H4Q3 707 aa16.35■□□□□ 0.21
GPC1-202ENST00000420138 TRAV30A0A087WSZ9 112 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 GNG7O60262 68 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 HYPMO75409 117 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 TOMM40O96008 361 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 YPEL3P61236 119 aaPredicted RBP16.34■□□□□ 0.21
GPC1-202ENST00000420138 KIAA0141Q14154 515 aaPredicted RBP16.34■□□□□ 0.21
GPC1-202ENST00000420138 C15orf32Q32M92 178 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 OR5AU1Q8NGC0 362 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 ZNF414Q96IQ9 312 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 TMEM167BQ9NRX6 74 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 ARL2-SNX15V9GYD0 113 aa16.34■□□□□ 0.21
GPC1-202ENST00000420138 OR7C2O60412 319 aa16.33■□□□□ 0.21
GPC1-202ENST00000420138 TEX29Q8N6K0 151 aa16.33■□□□□ 0.21
GPC1-202ENST00000420138 ZNF502Q8TBZ5 544 aa16.33■□□□□ 0.21
GPC1-202ENST00000420138 ANAPC16Q96DE5 110 aa16.33■□□□□ 0.21
GPC1-202ENST00000420138 MRPL27Q9P0M9 148 aaKnown RBP16.33■□□□□ 0.21
GPC1-202ENST00000420138 CTSGP08311 255 aa16.33■□□□□ 0.2
GPC1-202ENST00000420138 OR10J4P0C629 311 aa16.33■□□□□ 0.2
GPC1-202ENST00000420138 PPIFP30405 207 aaKnown RBP16.33■□□□□ 0.2
GPC1-202ENST00000420138 LYZP61626 148 aa16.33■□□□□ 0.2
GPC1-202ENST00000420138 SNRPEP62304 92 aaKnown RBP16.33■□□□□ 0.2
GPC1-202ENST00000420138 Q56UQ5 140 aa16.33■□□□□ 0.2
GPC1-202ENST00000420138 ZNF491Q8N8L2 437 aa16.33■□□□□ 0.2
GPC1-202ENST00000420138 NECAP1Q8NC96 275 aa16.33■□□□□ 0.2
GPC1-202ENST00000420138 TXN2Q99757 166 aa16.33■□□□□ 0.2
GPC1-202ENST00000420138 C5orf52A6NGY3 159 aa16.32■□□□□ 0.2
GPC1-202ENST00000420138 OR5R1Q8NH85 324 aa16.32■□□□□ 0.2
GPC1-202ENST00000420138 FAM210BQ96KR6 192 aa16.32■□□□□ 0.2
GPC1-202ENST00000420138 NOL4LQ96MY1 436 aaPredicted RBP16.32■□□□□ 0.2
GPC1-202ENST00000420138 MS4A10Q96PG2 267 aa16.32■□□□□ 0.2
GPC1-202ENST00000420138 WI2-2373I1.2A0A1W2PRP0 233 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 OR2T8A6NH00 312 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 H7BYZ3 331 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 PYYP10082 97 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 ADMP35318 185 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 CHRDL1Q9BU40 450 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 YAE1D1Q9NRH1 226 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 TRBV24-1A0A075B6N3 115 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 SCO2A0A1W2PP80 73 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 TGOLN2O43493 480 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 FABP1P07148 127 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 IL17RELQ6ZVW7 336 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 LINC01551Q86U37 167 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 CCDC140Q96MF4 163 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 DERL1Q9BUN8 251 aa16.31■□□□□ 0.2
GPC1-202ENST00000420138 AKR1D1P51857 326 aa16.3■□□□□ 0.2
GPC1-202ENST00000420138 FXYD5Q96DB9 178 aa16.3■□□□□ 0.2
GPC1-202ENST00000420138 OR51M1Q9H341 326 aa16.3■□□□□ 0.2
GPC1-202ENST00000420138 HIGD1AQ9Y241 93 aa16.3■□□□□ 0.2
GPC1-202ENST00000420138 BRI3O95415 125 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 PFN1P07737 140 aaKnown RBP16.29■□□□□ 0.2
GPC1-202ENST00000420138 C11orf52Q96A22 123 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 RNF125Q96EQ8 232 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 OR5B12Q96R08 314 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 PAXXQ9BUH6 204 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 SLC25A39Q9BZJ4 359 aaPredicted RBP16.29■□□□□ 0.2
GPC1-202ENST00000420138 VPREB3Q9UKI3 123 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 NOTCH2Q04721 2471 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 IL4P05112 153 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 S100PP25815 95 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 RPL35P42766 123 aaKnown RBP16.29■□□□□ 0.2
GPC1-202ENST00000420138 GALR1P47211 349 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 UBE2L3P68036 154 aaKnown RBP16.29■□□□□ 0.2
GPC1-202ENST00000420138 CFHR3Q02985 330 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 USF2Q15853 346 aaPredicted RBP16.29■□□□□ 0.2
GPC1-202ENST00000420138 LEMD1Q68G75 181 aa16.29■□□□□ 0.2
GPC1-202ENST00000420138 TLN2Q9Y4G6 2542 aa16.28■□□□□ 0.2
GPC1-202ENST00000420138 AP4M1O00189 453 aa16.28■□□□□ 0.2
GPC1-202ENST00000420138 UBE2CO00762 179 aa16.28■□□□□ 0.2
GPC1-202ENST00000420138 CD99P14209 185 aa16.28■□□□□ 0.2
GPC1-202ENST00000420138 ZNF580Q9UK33 172 aa16.28■□□□□ 0.2
GPC1-202ENST00000420138 ACANP16112 2415 aa16.27■□□□□ 0.2
GPC1-202ENST00000420138 GGTLC3B5MD39 225 aa16.27■□□□□ 0.2
GPC1-202ENST00000420138 HOXA3O43365 443 aaPredicted RBP16.27■□□□□ 0.2
GPC1-202ENST00000420138 CLEC3BP05452 202 aa16.27■□□□□ 0.2
GPC1-202ENST00000420138 GP9P14770 177 aa16.27■□□□□ 0.2
GPC1-202ENST00000420138 GPR183P32249 361 aa16.27■□□□□ 0.2
GPC1-202ENST00000420138 SRP14P37108 136 aaKnown RBP16.27■□□□□ 0.2
GPC1-202ENST00000420138 LINC00518Q8N0U6 118 aa16.27■□□□□ 0.2
GPC1-202ENST00000420138 PYGO2Q9BRQ0 406 aa16.27■□□□□ 0.2
GPC1-202ENST00000420138 MXRA5Q9NR99 2828 aa16.27■□□□□ 0.2
GPC1-202ENST00000420138 OTOGQ6ZRI0 2925 aa16.27■□□□□ 0.19
GPC1-202ENST00000420138 A0A1W2PRE2 83 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 STXBP6Q8NFX7 210 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 SHANK2-AS3Q9BTD1 123 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 FAM223BA6NKX1 122 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 H3BRN7 92 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 PPP1R2P9O14990 202 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 TMEM95Q3KNT9 176 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 FAM223AQ8IWN6 122 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 EEF1AKMT3Q96AZ1 226 aa16.26■□□□□ 0.19
GPC1-202ENST00000420138 TRBV20OR9-2A0A075B6H5 130 aa16.25■□□□□ 0.19
GPC1-202ENST00000420138 TRBV7-1A0A0A6YYK4 115 aa16.25■□□□□ 0.19
GPC1-202ENST00000420138 H3BUA1 57 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms