RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 SAA2P0DJI9 122 aaPredicted RBP10.31□□□□□ -0.76
LINC00642-201ENST00000419459 PRTN3P24158 256 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 RAB31Q13636 194 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 LDLRAD2Q5SZI1 272 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 NIT1Q86X76 327 aa10.31□□□□□ -0.76
LINC00642-201ENST00000419459 FNDC10F2Z333 226 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 J3QR06 171 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 RRHO14718 337 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 PROP1O75360 226 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 RBP4P02753 201 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 HNF1AP20823 631 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 PAX8Q06710 450 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 SLC25A48Q6ZT89 311 aaKnown RBP10.3□□□□□ -0.76
LINC00642-201ENST00000419459 OR10X1Q8NGY0 326 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 CLEC7AQ9BXN2 247 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 TMEM167BQ9NRX6 74 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 F8P00451 2351 aa10.3□□□□□ -0.76
LINC00642-201ENST00000419459 PPBPP02775 128 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 PMCHP20382 165 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 RPS16P62249 146 aaKnown RBP10.29□□□□□ -0.76
LINC00642-201ENST00000419459 RTL8BQ17RB0 113 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 TIGITQ495A1 244 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 MIC13Q5XKP0 118 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 BRD3OSQ6XYD6 125 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 LHFPL4Q7Z7J7 247 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 KIR3DL3Q8N743 410 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 OR9G1Q8NH87 305 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 WIPF2Q8TF74 440 aaPredicted RBP10.29□□□□□ -0.76
LINC00642-201ENST00000419459 C1orf159Q96HA4 380 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 ALKBH7Q9BT30 221 aaPredicted RBP10.29□□□□□ -0.76
LINC00642-201ENST00000419459 NF1P21359 2839 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 TRAV9-2A0A087WT02 112 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 SMIM27A0A1W2PRY6 76 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 HELTA6NFD8 242 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 BMPR1BO00238 502 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 CA2P00918 260 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 IGLV1-47P01700 117 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 IGHV4-38-2P0DP08 117 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
LINC00642-201ENST00000419459 GPR12P47775 334 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 CENPWQ5EE01 88 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 RUSC1-AS1Q66K80 236 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 TEPPQ6URK8 271 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 SLC24A4Q8NFF2 622 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 TSKUQ8WUA8 353 aa10.29□□□□□ -0.76
LINC00642-201ENST00000419459 NAV3Q8IVL0 2385 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 TRAV30A0A087WSZ9 112 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 CENPVL3A0A0U1RRI6 287 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 LINC00869P0C866 280 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 SRIP30626 198 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 C1orf122Q6ZSJ8 110 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 OR4A16Q8NH70 328 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 RCHY1Q96PM5 261 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 COMMD5Q9GZQ3 224 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
LINC00642-201ENST00000419459 SOX21Q9Y651 276 aaPredicted RBP10.28□□□□□ -0.76
LINC00642-201ENST00000419459 TEP1Q99973 2627 aaKnown RBP10.28□□□□□ -0.76
LINC00642-201ENST00000419459 NSD1Q96L73 2696 aaPredicted RBP10.28□□□□□ -0.76
LINC00642-201ENST00000419459 NIPBLQ6KC79 2804 aaeCLIP10.28□□□□□ -0.76
LINC00642-201ENST00000419459 IGLC7A0M8Q6 106 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 OR9G9P0C7N8 305 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 FBLN7Q53RD9 439 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 PIP4P2Q8N4L2 257 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 HILPDAQ9Y5L2 63 aa10.28□□□□□ -0.76
LINC00642-201ENST00000419459 IZUMO1RA6ND01 250 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 LINC00473A8K010 186 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 APCSP02743 223 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 SAA4P35542 130 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 ERVK-16P61578 105 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 SPINK9Q5DT21 86 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 IL17RELQ6ZVW7 336 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 STPG3Q8N7X2 389 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 C19orf24Q9BVV8 132 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 HIVEP2P31629 2446 aa10.27□□□□□ -0.77
LINC00642-201ENST00000419459 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 M0R1X1 148 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 DUTP33316 252 aaKnown RBP10.26□□□□□ -0.77
LINC00642-201ENST00000419459 KLF5Q13887 457 aaPredicted RBP10.26□□□□□ -0.77
LINC00642-201ENST00000419459 TMEM30BQ3MIR4 351 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 KLF17Q5JT82 389 aaPredicted RBP10.26□□□□□ -0.77
LINC00642-201ENST00000419459 OR4C5Q8NGB2 326 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 OR11H6Q8NGC7 330 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 SEPSECSQ9HD40 501 aaKnown RBP10.26□□□□□ -0.77
LINC00642-201ENST00000419459 IGHV3-72A0A0B4J1Y9 119 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 H0YJW9 148 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 FRMD6-AS1P0C7T7 363 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 KIR2DS2P43631 304 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
LINC00642-201ENST00000419459 RHOGP84095 191 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 PRR20EP86478 221 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 PRR20CP86479 221 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 PRR20DP86480 221 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 PRR20BP86481 221 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 PRR20AP86496 221 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 PQLC2Q6ZP29 291 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 DYNAPQ8N1N2 210 aa10.26□□□□□ -0.77
LINC00642-201ENST00000419459 C18orf32Q8TCD1 76 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms