RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 IGHV3OR16-13A0A075B7E8 117 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 IGHV3-49A0A0A0MS15 119 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 TRAV14DV4A0A0A6YYC5 116 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 IGHV3-74A0A0B4J1X5 117 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 A0A1B0GU03 582 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 CENPXA8MT69 81 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 PITX3O75364 302 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 SCGB2A1O75556 95 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 IFNA10P01566 189 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 IGKV1-17P01599 117 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 PSG1P11464 419 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 SLC25A4P12235 298 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 RND2P52198 227 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 UBE2MP61081 183 aaKnown RBP5.14□□□□□ -1.59
HMGN1-205ENST00000419378 TIGITQ495A1 244 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 LAMTOR1Q6IAA8 161 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 PRSS54Q6PEW0 395 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 DTD1Q8TEA8 209 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 URB1-AS1Q96HZ7 61 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 RNF2Q99496 336 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 C7orf50Q9BRJ6 194 aaKnown RBP5.14□□□□□ -1.59
HMGN1-205ENST00000419378 RETNQ9HD89 108 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 FLVCR2Q9UPI3 526 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 TMED3Q9Y3Q3 217 aa5.14□□□□□ -1.59
HMGN1-205ENST00000419378 TRAV30A0A087WSZ9 112 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 IGHV3-66A0A0C4DH42 116 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 C9orf170A2RU37 121 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 OR4C46A6NHA9 309 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 APOHP02749 345 aaPredicted RBP5.13□□□□□ -1.59
HMGN1-205ENST00000419378 IGLC1P0CG04 106 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 SLC25A6P12236 298 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 ANXA7P20073 488 aaKnown RBP5.13□□□□□ -1.59
HMGN1-205ENST00000419378 DHRS2Q13268 280 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 GGNBP1Q5YKI7 109 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 ETFRF1Q6IPR1 90 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 OR1S2Q8NGQ3 325 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 GGTLC1Q9BX51 225 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 VSIRQ9H7M9 311 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 UBQLN2Q9UHD9 624 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 U3KQ87 197 aa5.13□□□□□ -1.59
HMGN1-205ENST00000419378 RYR2Q92736 4967 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 CSMD3Q7Z407 3707 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 IGKV3-7A0A075B6H7 116 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 LOC102724200A0A096LPH7 203 aaPredicted RBP5.12□□□□□ -1.59
HMGN1-205ENST00000419378 FAM90A26D6RGX4 464 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 PLA2G10O15496 165 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 LYRM1O43325 122 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 ADAP1O75689 374 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 OR4E1P0C645 316 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 IAPPP10997 89 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 OR10J1P30954 320 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 BMI1P35226 326 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 ATP5IP56385 69 aaPredicted RBP5.12□□□□□ -1.59
HMGN1-205ENST00000419378 YPEL3P61236 119 aaPredicted RBP5.12□□□□□ -1.59
HMGN1-205ENST00000419378 TCF24Q7RTU0 167 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 LYG2Q86SG7 212 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 COQ8AQ8NI60 647 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 ACY3Q96HD9 319 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 METTL26Q96S19 204 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 FAM110AQ9BQ89 295 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 CCDC32Q9BV29 185 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 C20orf85Q9H1P6 137 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 EDA2RQ9HAV5 297 aa5.12□□□□□ -1.59
HMGN1-205ENST00000419378 A0A1W2PS18 150 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 MPTX1A8MV57 137 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 SYNGR2O43760 224 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 MED6O75586 246 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 DFFBO76075 338 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 NDUFB4O95168 129 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 TOMM40O96008 361 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 IFNA4P05014 189 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 CD5P06127 495 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 NPPCP23582 126 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 CRYBB3P26998 211 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 TFPI2P48307 235 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 GAMTQ14353 236 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 CNPY1Q3B7I2 92 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 C16orf54Q6UWD8 224 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 LINC00299Q6ZSB3 139 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 ZNF575Q86XF7 245 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 GBGT1Q8N5D6 347 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 MUC7Q8TAX7 377 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 Q8WTZ3 238 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 SLC35E1Q96K37 410 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 CIB3Q96Q77 187 aaPredicted RBP5.11□□□□□ -1.59
HMGN1-205ENST00000419378 MAGT1Q9H0U3 335 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 TMEM231Q9H6L2 316 aa5.11□□□□□ -1.59
HMGN1-205ENST00000419378 PLECQ15149 4684 aaKnown RBP5.11□□□□□ -1.59
HMGN1-205ENST00000419378 IGKV1D-37A0A075B6S9 117 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 TRAV2A0A0B4J234 112 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 C3orf84H3BNL1 204 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 H3BP45 60 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 WRBO00258 174 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 IFNA21P01568 189 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 TCRBP04435 133 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 IL4P05112 153 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 RD3LP0DJH9 198 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 GPX4P36969 197 aaPredicted RBP5.1□□□□□ -1.59
HMGN1-205ENST00000419378 P2RY1P47900 373 aa5.1□□□□□ -1.59
HMGN1-205ENST00000419378 APOC4P55056 127 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms