RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 NMES1Q9C002 83 aa13.29□□□□□ -0.28
VCP-202ENST00000417448 DFFBO76075 338 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 PVALBP20472 110 aaPredicted RBP13.28□□□□□ -0.28
VCP-202ENST00000417448 LYZP61626 148 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 DLK1P80370 383 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 PRR20EP86478 221 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 PRR20CP86479 221 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 PRR20DP86480 221 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 PRR20BP86481 221 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 PRR20AP86496 221 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 WFDC3Q8IUB2 231 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 OR11H7Q8NGC8 314 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 PPP1R1CQ8WVI7 109 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 METTL26Q96S19 204 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 TRGV9Q99603 122 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 MED28Q9H204 178 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
VCP-202ENST00000417448 CRYBB3P26998 211 aa13.27□□□□□ -0.29
VCP-202ENST00000417448 SLC38A11Q08AI6 406 aa13.27□□□□□ -0.29
VCP-202ENST00000417448 OXA1LQ15070 435 aa13.27□□□□□ -0.29
VCP-202ENST00000417448 TMEM252Q8N6L7 170 aa13.27□□□□□ -0.29
VCP-202ENST00000417448 STPG3Q8N7X2 389 aa13.27□□□□□ -0.29
VCP-202ENST00000417448 RNF126Q9BV68 326 aa13.27□□□□□ -0.29
VCP-202ENST00000417448 VSIRQ9H7M9 311 aa13.27□□□□□ -0.29
VCP-202ENST00000417448 LYRM2Q9NU23 88 aaPredicted RBP13.27□□□□□ -0.29
VCP-202ENST00000417448 KLK5Q9Y337 293 aaPredicted RBP13.27□□□□□ -0.29
VCP-202ENST00000417448 HNRNPCP07910 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
VCP-202ENST00000417448 NHLH2Q02577 135 aa13.26□□□□□ -0.29
VCP-202ENST00000417448 TMEM144Q7Z5S9 345 aa13.26□□□□□ -0.29
VCP-202ENST00000417448 RNF125Q96EQ8 232 aa13.26□□□□□ -0.29
VCP-202ENST00000417448 KRTAP4-5Q9BYR2 181 aa13.26□□□□□ -0.29
VCP-202ENST00000417448 AGRNO00468 2067 aa13.25□□□□□ -0.29
VCP-202ENST00000417448 RLN2P04090 185 aa13.25□□□□□ -0.29
VCP-202ENST00000417448 P2RY1P47900 373 aa13.25□□□□□ -0.29
VCP-202ENST00000417448 RPL11P62913 178 aaKnown RBP13.25□□□□□ -0.29
VCP-202ENST00000417448 CYCSP99999 105 aaKnown RBP13.25□□□□□ -0.29
VCP-202ENST00000417448 FAM90A2PQ658T7 463 aa13.25□□□□□ -0.29
VCP-202ENST00000417448 LAMTOR1Q6IAA8 161 aa13.25□□□□□ -0.29
VCP-202ENST00000417448 DOK5Q9P104 306 aa13.25□□□□□ -0.29
VCP-202ENST00000417448 U3KQE9 123 aa13.25□□□□□ -0.29
VCP-202ENST00000417448 DYNC1H1Q14204 4646 aaKnown RBP13.25□□□□□ -0.29
VCP-202ENST00000417448 DNAH17Q9UFH2 4485 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 TRAV25A0A0B4J276 109 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 TSPAN4O14817 238 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 MPC2O95563 127 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 MED14OSP0DP75 135 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 SULT1A1P50225 295 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 CYP2G1PQ6ZSU1 146 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 GGTLC1Q9BX51 225 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 NPVFQ9HCQ7 196 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 RABAC1Q9UI14 185 aa13.24□□□□□ -0.29
VCP-202ENST00000417448 E5RGE8 158 aa13.23□□□□□ -0.29
VCP-202ENST00000417448 ORM2P19652 201 aa13.23□□□□□ -0.29
VCP-202ENST00000417448 ZNF124Q15973 351 aa13.23□□□□□ -0.29
VCP-202ENST00000417448 Q5BKY6 102 aa13.23□□□□□ -0.29
VCP-202ENST00000417448 DNAH11Q96DT5 4516 aa13.23□□□□□ -0.29
VCP-202ENST00000417448 C16orf54Q6UWD8 224 aa13.22□□□□□ -0.29
VCP-202ENST00000417448 FAM24BQ8N5W8 94 aa13.22□□□□□ -0.29
VCP-202ENST00000417448 STXBP6Q8NFX7 210 aa13.22□□□□□ -0.29
VCP-202ENST00000417448 OR1B1Q8NGR6 318 aa13.22□□□□□ -0.29
VCP-202ENST00000417448 MGST2Q99735 147 aa13.22□□□□□ -0.29
VCP-202ENST00000417448 MS4A6AQ9H2W1 248 aa13.22□□□□□ -0.29
VCP-202ENST00000417448 MBD2Q9UBB5 411 aa13.22□□□□□ -0.29
VCP-202ENST00000417448 PKD1P98161 4303 aa13.22□□□□□ -0.29
VCP-202ENST00000417448 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 A0A1B0GVY2 172 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 A0A1W2PS18 150 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 FABP1P07148 127 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 EIF2B2P49770 351 aaKnown RBP13.21□□□□□ -0.29
VCP-202ENST00000417448 TEPPQ6URK8 271 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 STX12Q86Y82 276 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 BPIFCQ8NFQ6 507 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 PHLDA1Q8WV24 401 aaPredicted RBP13.21□□□□□ -0.29
VCP-202ENST00000417448 GLMPQ8WWB7 406 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 PPP1R14BQ96C90 147 aa13.21□□□□□ -0.29
VCP-202ENST00000417448 NARS2Q96I59 477 aaKnown RBP13.21□□□□□ -0.29
VCP-202ENST00000417448 SPAG8Q99932 426 aaPredicted RBP13.21□□□□□ -0.29
VCP-202ENST00000417448 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
VCP-202ENST00000417448 DNASE2O00115 360 aaPredicted RBP13.2□□□□□ -0.3
VCP-202ENST00000417448 AGPAT2O15120 278 aa13.2□□□□□ -0.3
VCP-202ENST00000417448 BUB3O43684 328 aa13.2□□□□□ -0.3
VCP-202ENST00000417448 CLINT1Q14677 625 aa13.2□□□□□ -0.3
VCP-202ENST00000417448 ODF3L2Q3SX64 289 aa13.2□□□□□ -0.3
VCP-202ENST00000417448 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
VCP-202ENST00000417448 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
VCP-202ENST00000417448 TMEM231Q9H6L2 316 aa13.2□□□□□ -0.3
VCP-202ENST00000417448 UQCC1Q9NVA1 299 aa13.2□□□□□ -0.3
VCP-202ENST00000417448 FNDC10F2Z333 226 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 LINC00869P0C866 280 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 ATF4P18848 351 aaPredicted RBP13.19□□□□□ -0.3
VCP-202ENST00000417448 S100A11P31949 105 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 BMI1P35226 326 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 OR5C1Q8NGR4 320 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 GRAMD2BQ96HH9 432 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 TMEM147Q9BVK8 224 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 GGACTQ9BVM4 153 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 SMIM3Q9BZL3 60 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 SLC25A31Q9H0C2 315 aa13.19□□□□□ -0.3
VCP-202ENST00000417448 ARL6Q9H0F7 186 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms