RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CDKN1BP46527 198 aa10.3□□□□□ -0.76
LRRTM1-205ENST00000417012 PRR31Q5SQ13 230 aa10.3□□□□□ -0.76
LRRTM1-205ENST00000417012 TEX36Q5VZQ5 186 aa10.3□□□□□ -0.76
LRRTM1-205ENST00000417012 CHCHD1Q96BP2 118 aaKnown RBP10.3□□□□□ -0.76
LRRTM1-205ENST00000417012 URB1-AS1Q96HZ7 61 aa10.3□□□□□ -0.76
LRRTM1-205ENST00000417012 ST20Q9HBF5 79 aa10.3□□□□□ -0.76
LRRTM1-205ENST00000417012 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
LRRTM1-205ENST00000417012 LRBAP50851 2863 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 MEF2CQ06413 473 aaPredicted RBP10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 PRR30Q53SZ7 412 aaPredicted RBP10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 CT83Q5H943 113 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 DAZAP1Q96EP5 407 aaKnown RBP10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 M0QZ24 198 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 NBEAP1P0C6P0 100 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 NBL1P41271 181 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 FAM120AOSQ5T036 256 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 C5orf17Q8NAS9 161 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 ST6GALNAC6Q969X2 333 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 FMC1Q96HJ9 113 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 PGLYRP4Q96LB8 373 aa10.29□□□□□ -0.76
LRRTM1-205ENST00000417012 IGHV1-24A0A0C4DH33 117 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 SYS1-DBNDD2H3BUS1 97 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 CRXO43186 299 aaPredicted RBP10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 LEPROTL1O95214 131 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 FBLN7Q53RD9 439 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 TMEM108Q6UXF1 575 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 C1RLQ9NZP8 487 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 WASHC3Q9Y3C0 194 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 ZZEF1O43149 2961 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 NAV3Q8IVL0 2385 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 FOXC1Q12948 553 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 VMA21Q3ZAQ7 101 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 ASCL5Q7RTU5 278 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 Q8NA96 180 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 ZNF492Q9P255 531 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 TACC2O95359 2948 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 PRRG2O14669 202 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 CHEK1O14757 476 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 LINC00322Q6ZN03 302 aaPredicted RBP10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 RBPMS2Q6ZRY4 209 aaKnown RBP10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 GTSF1Q8WW33 167 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 PRSS22Q9GZN4 317 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 TMEM191AQ9H0A3 160 aa10.28□□□□□ -0.76
LRRTM1-205ENST00000417012 IGHV2-70DA0A0C4DH43 119 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 A0A1W2PPI3 338 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 SLC25A17O43808 307 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 LTAP01374 205 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 TMEM186Q96B77 213 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 C22orf46C9J442 243 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 C16orf97H3BN30 126 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 TNFRSF1AP19438 455 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 CD24P25063 80 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 ZNF137PP52743 207 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 BSPH1Q075Z2 132 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 VAMP3Q15836 100 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 FAM71F2Q6NXP2 309 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 GFRALQ6UXV0 394 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 H1FXQ92522 213 aaKnown RBP10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 GFRA4Q9GZZ7 299 aa10.27□□□□□ -0.77
LRRTM1-205ENST00000417012 PTPRQQ9UMZ3 2332 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 K7EP13 123 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 IGLV2-23P01705 113 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 DIAPH2-AS1Q14236 149 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 LRRC10Q5BKY1 277 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 LHFPL4Q7Z7J7 247 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 TRGV9Q99603 122 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 Q9H3A6 140 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 hDV102S1A0JD36 115 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 TCRAP04437 139 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 LIPFP07098 398 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 MPV17L2Q567V2 206 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 TMEM200BQ69YZ2 307 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 SLC25A34Q6PIV7 304 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 DCHS2Q6V1P9 2916 aa10.26□□□□□ -0.77
LRRTM1-205ENST00000417012 THBDP07204 575 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 OR5AL1P0C617 328 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 HCP5Q6MZN7 132 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 MAP1LC3CQ9BXW4 147 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 TPSG1Q9NRR2 321 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 TP73-AS1Q9UF72 201 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 ZNF835Q9Y2P0 537 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 NBASA2RRP1 2371 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 LOC105371242A0A075B767 164 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 H3BTX0 84 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 GP9P14770 177 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 COL8A1P27658 744 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 ADIPOQQ15848 244 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 SPTA1P02549 2419 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 FAM231BA6NCW3 169 aa10.25□□□□□ -0.77
LRRTM1-205ENST00000417012 TRAV30A0A087WSZ9 112 aa10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 CRYGCP07315 174 aa10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 FAM87AP0C7U9 286 aa10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 ENSAO43768 121 aaKnown RBP10.24□□□□□ -0.77
LRRTM1-205ENST00000417012 NUDT3O95989 172 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms