RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 SOCS3O14543 225 aa12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 SPANXN5Q5MJ07 72 aa12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 SPATA31B1PQ5VZV4 182 aa12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 COQ8AQ8NI60 647 aa12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 CLUHP3Q96NS8 147 aa12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 SLC45A2Q9UMX9 530 aa12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 STRAPQ9Y3F4 350 aaKnown RBP12.69□□□□□ -0.38
PDLIM2-208ENST00000416159 ISLRO14498 428 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 NDUFB6O95139 128 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 S100A7P31151 101 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 GALR1P47211 349 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 ID3Q02535 119 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 GDF5OSQ5U4N7 250 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 TRIQKQ629K1 86 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 Q6ZTC4 211 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 BPIFCQ8NFQ6 507 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 NEU1Q99519 415 aa12.68□□□□□ -0.38
PDLIM2-208ENST00000416159 SMIM9A6NGZ8 99 aa12.67□□□□□ -0.38
PDLIM2-208ENST00000416159 MEOX2P50222 304 aa12.67□□□□□ -0.38
PDLIM2-208ENST00000416159 AKR1C1Q04828 323 aa12.67□□□□□ -0.38
PDLIM2-208ENST00000416159 BAK1Q16611 211 aa12.67□□□□□ -0.38
PDLIM2-208ENST00000416159 ZNF705AQ6ZN79 300 aaPredicted RBP12.67□□□□□ -0.38
PDLIM2-208ENST00000416159 KMT2AQ03164 3969 aa12.67□□□□□ -0.38
PDLIM2-208ENST00000416159 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 ADAP1O75689 374 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 IFNA21P01568 189 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 IGKV3-20P01619 116 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 PAX9P55771 341 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 DEFB1P60022 68 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 C12orf74Q32Q52 190 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 EBLN2Q6P2I7 272 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 TMEM144Q7Z5S9 345 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 OR4B1Q8NGF8 309 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 RNF126Q9BV68 326 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 CELA1Q9UNI1 258 aa12.66□□□□□ -0.38
PDLIM2-208ENST00000416159 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 CENPXA8MT69 81 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 H3BP45 60 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 ORM2P19652 201 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 FXYD7P58549 80 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 POLR2GP62487 172 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 OR4D5Q8NGN0 318 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 C16orf92Q96LL3 132 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 GPR82Q96P67 336 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 TMEM147Q9BVK8 224 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 SLC25A22Q9H936 323 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 RPRMQ9NS64 109 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 PSENENQ9NZ42 101 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 FLVCR2Q9UPI3 526 aa12.65□□□□□ -0.38
PDLIM2-208ENST00000416159 DEFB131BA0A096LNP1 70 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 ZNF705FA8MVS1 300 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 OR4E1P0C645 316 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 ZNF705DP0CH99 300 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 ZNF705BP0CI00 300 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 GATA2P23769 480 aaPredicted RBP12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 PRR20EP86478 221 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 PRR20CP86479 221 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 PRR20DP86480 221 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 PRR20BP86481 221 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 PRR20AP86496 221 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 PSG9Q00887 426 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 ACOT7LQ6ZUV0 252 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 OR1B1Q8NGR6 318 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 C7orf50Q9BRJ6 194 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 RSG1Q9BU20 258 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 SLC25A32Q9H2D1 315 aa12.64□□□□□ -0.39
PDLIM2-208ENST00000416159 A0A0J9YX75 114 aa12.63□□□□□ -0.39
PDLIM2-208ENST00000416159 CNPY1Q3B7I2 92 aa12.63□□□□□ -0.39
PDLIM2-208ENST00000416159 FAM78BQ5VT40 261 aa12.63□□□□□ -0.39
PDLIM2-208ENST00000416159 TMEM182Q6ZP80 229 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-208ENST00000416159 ZNF709Q8N972 641 aa12.63□□□□□ -0.39
PDLIM2-208ENST00000416159 SMIM8Q96KF7 97 aa12.63□□□□□ -0.39
PDLIM2-208ENST00000416159 SDHCQ99643 169 aaPredicted RBP12.63□□□□□ -0.39
PDLIM2-208ENST00000416159 IGHV3OR16-12A0A075B7B8 117 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 LINC00854A0A1B0GVQ3 168 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 SMCO3A2RU48 225 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 F6UB75 175 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 IL5P05113 134 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 SPART-AS1P0CW21 52 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 C4orf46Q504U0 113 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 GSG1LQ6UXU4 331 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 CYP2G1PQ6ZSU1 146 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 ZNF767PQ75MW2 155 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 C20orf173Q96LM9 149 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 SLC35B3Q9H1N7 401 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 GOLT1BQ9Y3E0 138 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 RFNGQ9Y644 331 aa12.62□□□□□ -0.39
PDLIM2-208ENST00000416159 PMS2P5A8MQ11 134 aa12.61□□□□□ -0.39
PDLIM2-208ENST00000416159 SSSCA1O60232 199 aa12.61□□□□□ -0.39
PDLIM2-208ENST00000416159 ANXA7P20073 488 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-208ENST00000416159 RAP2BP61225 183 aa12.61□□□□□ -0.39
PDLIM2-208ENST00000416159 C17orf77Q96MU5 243 aa12.61□□□□□ -0.39
PDLIM2-208ENST00000416159 DOK5Q9P104 306 aa12.61□□□□□ -0.39
PDLIM2-208ENST00000416159 TEX48A0A1B0GUV7 120 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 H3BRN7 92 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 AMBPP02760 352 aa12.6□□□□□ -0.39
PDLIM2-208ENST00000416159 BTCP35070 178 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms