RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ASIPP42127 132 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 WFDC12Q8WWY7 111 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 RAX2Q96IS3 184 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 MGST2Q99735 147 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 NPIPB5A8MRT5 1133 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 PDLIM4P50479 330 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 ATP5J2P56134 94 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 ACTL10Q5JWF8 245 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 BEND2Q8NDZ0 799 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 DUX5Q96PT3 197 aa10.64□□□□□ -0.71
SCN1B-202ENST00000415950 J3QW42 95 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 TDGF1P3P51864 188 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 TMPRSS3P57727 454 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 C17orf82Q86X59 251 aaPredicted RBP10.63□□□□□ -0.71
SCN1B-202ENST00000415950 C9orf106Q8NAJ2 232 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 C15orf61A6NNL5 157 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 NCR2O95944 276 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 DTX1Q86Y01 620 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 FMC1Q96HJ9 113 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 ALPK3Q96L96 1907 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 TRAV8-1A0A0A6YYK1 113 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 RAB9AP51151 201 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 BSPH1Q075Z2 132 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 RANBP2P49792 3224 aaKnown RBP10.63□□□□□ -0.71
SCN1B-202ENST00000415950 LOC102723996A0A087X1L8 192 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
SCN1B-202ENST00000415950 CD69Q07108 199 aa10.63□□□□□ -0.71
SCN1B-202ENST00000415950 TRAV9-1A0A075B6T8 112 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 C15orf62A8K5M9 175 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 SNRPD3P62318 126 aaKnown RBP10.62□□□□□ -0.71
SCN1B-202ENST00000415950 Q0VFX4 171 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 HAPLN4Q86UW8 402 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 PLXNA4Q9HCM2 1894 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 TANC1Q9C0D5 1861 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 IL18BPO95998 194 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 TDRG1Q3Y452 100 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 NUDT10Q8NFP7 164 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 LINC00527Q9UJ94 153 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 SORL1Q92673 2214 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 IGHV3-64A0A075B6Q5 118 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 HBDP02042 147 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 CENPVQ7Z7K6 275 aaPredicted RBP10.62□□□□□ -0.71
SCN1B-202ENST00000415950 ORAOV1Q8WV07 137 aa10.62□□□□□ -0.71
SCN1B-202ENST00000415950 A0A087X0K7 114 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 F2Z2F3 143 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 IGHV4-39P01824 125 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 NUP37Q8NFH4 326 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 IFI27L1Q96BM0 104 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 PLXNB3Q9ULL4 1909 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 IQCF6A8MYZ5 107 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 CD300EQ496F6 205 aaPredicted RBP10.61□□□□□ -0.71
SCN1B-202ENST00000415950 EXOC3-AS1Q8N2X6 119 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 GNB1LQ9BYB4 327 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 B9A039 149 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 NPFFO15130 113 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 YPEL1O60688 119 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 PPP1R27Q86WC6 154 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 ARPC1AQ92747 370 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 RNF125Q96EQ8 232 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 YPEL2Q96QA6 119 aa10.61□□□□□ -0.71
SCN1B-202ENST00000415950 ZNF503-AS2A6NEH8 195 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 DSCAML1Q8TD84 2053 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 NACAE9PAV3 2078 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 TMEM30BQ3MIR4 351 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.6□□□□□ -0.71
SCN1B-202ENST00000415950 ANAPC10Q9UM13 185 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 TLN1Q9Y490 2541 aaKnown RBP10.6□□□□□ -0.71
SCN1B-202ENST00000415950 NUPR1O60356 82 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 APOBEC3AP31941 199 aaPredicted RBP10.6□□□□□ -0.71
SCN1B-202ENST00000415950 Q6ZWC4 215 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 ZNF479Q96JC4 524 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 NAV3Q8IVL0 2385 aa10.6□□□□□ -0.71
SCN1B-202ENST00000415950 C17orf100A8MU93 164 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 Q6P435 159 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 MTURNQ8N3F0 131 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 ITLN2Q8WWU7 325 aaPredicted RBP10.59□□□□□ -0.71
SCN1B-202ENST00000415950 LINC00312Q9Y6C7 94 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 COL4A3Q01955 1670 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 PMS2P5A8MQ11 134 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 TM4SF5O14894 197 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 GTSCR1Q86UQ5 136 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 TSKUQ8WUA8 353 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 OTORQ9NRC9 128 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 TCRBV4S1A1TA0A5B7 111 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 SRD5A1P18405 259 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 Q6AWC8 147 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 KIAA1671Q9BY89 1806 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 GFRA3O60609 400 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 KLF17Q5JT82 389 aaPredicted RBP10.59□□□□□ -0.71
SCN1B-202ENST00000415950 TPTE2P1Q5T6R2 138 aa10.59□□□□□ -0.71
SCN1B-202ENST00000415950 MED12LQ86YW9 2145 aa10.58□□□□□ -0.71
SCN1B-202ENST00000415950 TRBV7-9A0A0J9YWB2 115 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 DPM2O94777 84 aa10.58□□□□□ -0.72
SCN1B-202ENST00000415950 CD7P09564 240 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms