RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZNF318Q5VUA4 2279 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 IGLC7A0M8Q6 106 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 C19orf71A6NCJ1 209 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 C22orf46C9J442 243 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 LTAP01374 205 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 HBBP68871 147 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 ORAOV1Q8WV07 137 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
CD44-206ENST00000415148 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 SLC25A17O43808 307 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 MOSP00540 346 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 CRYGBP07316 175 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 ORM2P19652 201 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 TMEM155Q4W5P6 130 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 OR1B1Q8NGR6 318 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 RPH3ALQ9UNE2 315 aa7.84□□□□□ -1.15
CD44-206ENST00000415148 CRXO43186 299 aaPredicted RBP7.83□□□□□ -1.16
CD44-206ENST00000415148 IGHV1-8P0DP01 117 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 LOXP28300 417 aaPredicted RBP7.83□□□□□ -1.16
CD44-206ENST00000415148 ZNF138P52744 262 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 ZC2HC1AQ96GY0 325 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 TRBV6-1A0A0K0K1D8 114 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 P01737 135 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 TCRAP04437 139 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 GP9P14770 177 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 RPL27AP46776 148 aaKnown RBP7.83□□□□□ -1.16
CD44-206ENST00000415148 UBE2V1Q13404 147 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 LYPD2Q6UXB3 125 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 BLNKQ8WV28 456 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 GTSF1Q8WW33 167 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 DAZAP1Q96EP5 407 aaKnown RBP7.83□□□□□ -1.16
CD44-206ENST00000415148 ASCL2Q99929 193 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 NDFIP1Q9BT67 221 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 TMEM133Q9H2Q1 129 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 TMEM14CQ9P0S9 112 aa7.83□□□□□ -1.16
CD44-206ENST00000415148 BSNQ9UPA5 3926 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 CUL9Q8IWT3 2517 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 NPIPB6E9PJ23 425 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 BSPH1Q075Z2 132 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 LEMD1Q68G75 181 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 RBPMS2Q6ZRY4 209 aaKnown RBP7.82□□□□□ -1.16
CD44-206ENST00000415148 WFDC8Q8IUA0 241 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 MUC15Q8N387 334 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 CCL17Q92583 94 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 RITA1Q96K30 269 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 TMEM70Q9BUB7 260 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 Q9H3A6 140 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 OTORQ9NRC9 128 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 TPSG1Q9NRR2 321 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 IGHV3-21A0A0B4J1V1 117 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 ENSAO43768 121 aaKnown RBP7.82□□□□□ -1.16
CD44-206ENST00000415148 OR5AL1P0C617 328 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 APELAP0DMC3 54 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 MPV17L2Q567V2 206 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 PMCHL2Q9BQD1 86 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 JKAMPQ9P055 326 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 CTSZQ9UBR2 303 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 RNF24Q9Y225 148 aa7.82□□□□□ -1.16
CD44-206ENST00000415148 A0A0G2JNJ9 132 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 PRRG2O14669 202 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 THBDP07204 575 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 HCP5Q6MZN7 132 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 RNASE6Q93091 150 aaKnown RBP7.81□□□□□ -1.16
CD44-206ENST00000415148 RNF5Q99942 180 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 SRSF8Q9BRL6 282 aaKnown RBP7.81□□□□□ -1.16
CD44-206ENST00000415148 COL25A1Q9BXS0 654 aaPredicted RBP7.81□□□□□ -1.16
CD44-206ENST00000415148 Q9UFV3 132 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 HIGD1AQ9Y241 93 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 SIGLEC9Q9Y336 463 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 F11RQ9Y624 299 aaKnown RBP7.81□□□□□ -1.16
CD44-206ENST00000415148 CACNA1HO95180 2353 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 IGHV1-24A0A0C4DH33 117 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 HAX1O00165 279 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 FBLN7Q53RD9 439 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 ZNF738Q8NE65 137 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 PGLYRP4Q96LB8 373 aa7.81□□□□□ -1.16
CD44-206ENST00000415148 GSX1Q9H4S2 264 aaPredicted RBP7.81□□□□□ -1.16
CD44-206ENST00000415148 CEP250Q9BV73 2442 aa7.8□□□□□ -1.16
CD44-206ENST00000415148 ATMQ13315 3056 aa7.8□□□□□ -1.16
CD44-206ENST00000415148 IGHV1-69-2A0A0G2JMI3 117 aa7.8□□□□□ -1.16
CD44-206ENST00000415148 OR4C46A6NHA9 309 aa7.8□□□□□ -1.16
CD44-206ENST00000415148 FAM87AP0C7U9 286 aa7.8□□□□□ -1.16
CD44-206ENST00000415148 HOXB4P17483 251 aaPredicted RBP7.8□□□□□ -1.16
CD44-206ENST00000415148 PRB3Q04118 309 aaPredicted RBP7.8□□□□□ -1.16
CD44-206ENST00000415148 C16orf54Q6UWD8 224 aa7.8□□□□□ -1.16
CD44-206ENST00000415148 NGBQ9NPG2 151 aa7.8□□□□□ -1.16
CD44-206ENST00000415148 IGHV2-70DA0A0C4DH43 119 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 H0Y8G0 127 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 IGLV1-47P01700 117 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 DLX1P56177 255 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 RBPJQ06330 500 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 RNF151Q2KHN1 245 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 PPP1R27Q86WC6 154 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 ST20Q9HBF5 79 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 ZNF835Q9Y2P0 537 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 PKDREJQ9NTG1 2253 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 SVEP1Q4LDE5 3571 aa7.79□□□□□ -1.16
CD44-206ENST00000415148 LOC102724200A0A096LPH7 203 aaPredicted RBP7.79□□□□□ -1.16
CD44-206ENST00000415148 TRAV8-1A0A0A6YYK1 113 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms