RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TMEM41BQ5BJD5 291 aa8.23□□□□□ -1.09
RFFL-204ENST00000414419 MORN3Q6PF18 240 aaPredicted RBP8.23□□□□□ -1.09
RFFL-204ENST00000414419 TMEM14EPQ6UXP3 125 aa8.23□□□□□ -1.09
RFFL-204ENST00000414419 OR1B1Q8NGR6 318 aa8.23□□□□□ -1.09
RFFL-204ENST00000414419 OR11H2Q8NH07 326 aa8.23□□□□□ -1.09
RFFL-204ENST00000414419 TMEM147Q9BVK8 224 aa8.23□□□□□ -1.09
RFFL-204ENST00000414419 NPVFQ9HCQ7 196 aa8.23□□□□□ -1.09
RFFL-204ENST00000414419 TBC1D24Q9ULP9 559 aa8.23□□□□□ -1.09
RFFL-204ENST00000414419 SLC45A2Q9UMX9 530 aa8.23□□□□□ -1.09
RFFL-204ENST00000414419 TENM2Q9NT68 2774 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 DNAH7Q8WXX0 4024 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 UPK1BO75841 260 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 MBPP02686 304 aaPredicted RBP8.22□□□□□ -1.09
RFFL-204ENST00000414419 PVALBP20472 110 aaPredicted RBP8.22□□□□□ -1.09
RFFL-204ENST00000414419 GATA2P23769 480 aaPredicted RBP8.22□□□□□ -1.09
RFFL-204ENST00000414419 GALR1P47211 349 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 BCAP31P51572 246 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 PAX9P55771 341 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 RAP2BP61225 183 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 NUTF2P61970 127 aaKnown RBP8.22□□□□□ -1.09
RFFL-204ENST00000414419 DLK1P80370 383 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 GSG1LQ6UXU4 331 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 CYP2G1PQ6ZSU1 146 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 S100A7AQ86SG5 101 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 TRPT1Q86TN4 253 aaKnown RBP8.22□□□□□ -1.09
RFFL-204ENST00000414419 C2orf50Q96LR7 162 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 LINC00052Q96N35 136 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 SLC25A22Q9H936 323 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 GPN1Q9HCN4 374 aaPredicted RBP8.22□□□□□ -1.09
RFFL-204ENST00000414419 BATF3Q9NR55 127 aa8.22□□□□□ -1.09
RFFL-204ENST00000414419 RCL1Q9Y2P8 373 aaKnown RBP8.22□□□□□ -1.09
RFFL-204ENST00000414419 LSM5Q9Y4Y9 91 aaKnown RBP8.22□□□□□ -1.09
RFFL-204ENST00000414419 C7orf66A4D0T2 115 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 CXorf65A6NEN9 183 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 PMS2P5A8MQ11 134 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 FNDC10F2Z333 226 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 CCNKO75909 580 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 MEOX2P50222 304 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 SELENOTP62341 195 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 SAMD13Q5VXD3 122 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 TEPPQ6URK8 271 aa8.21□□□□□ -1.1
RFFL-204ENST00000414419 ZNF98A6NK75 572 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 K7EPK0 472 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 HYPMO75409 117 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 JTBO76095 146 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 OR5G3P0C626 314 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 LINC00869P0C866 280 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 ATF4P18848 351 aaPredicted RBP8.2□□□□□ -1.1
RFFL-204ENST00000414419 PSMB3P49720 205 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 CAV2P51636 162 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 S100A10P60903 97 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 PMS2P11Q13670 270 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 TMEM182Q6ZP80 229 aaPredicted RBP8.2□□□□□ -1.1
RFFL-204ENST00000414419 GPR82Q96P67 336 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 GGACTQ9BVM4 153 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 DOK5Q9P104 306 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 HIGD1AQ9Y241 93 aa8.2□□□□□ -1.1
RFFL-204ENST00000414419 LCE6AA0A183 80 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 NUPR2A6NF83 97 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 ISLRO14498 428 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 GOSR2O14653 212 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 DEFA1P59665 94 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 DEFA3P59666 94 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 C16orf92Q96LL3 132 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 RSG1Q9BU20 258 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 C1QTNF4Q9BXJ3 329 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 SLC25A32Q9H2D1 315 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 RNF24Q9Y225 148 aa8.19□□□□□ -1.1
RFFL-204ENST00000414419 KMT2CQ8NEZ4 4911 aaKnown RBP8.19□□□□□ -1.1
RFFL-204ENST00000414419 H3BMM0 161 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 PRAF2O60831 178 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 DEDDO75618 318 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 HLA-DRB4P13762 266 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 PLP1P60201 277 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 FGL1Q08830 312 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 SLC38A11Q08AI6 406 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 RAB31Q13636 194 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 EBLN2Q6P2I7 272 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 FOXI2Q6ZQN5 318 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 NRARPQ7Z6K4 114 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 ZNF546Q86UE3 836 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 SLC25A39Q9BZJ4 359 aaPredicted RBP8.18□□□□□ -1.1
RFFL-204ENST00000414419 MFFQ9GZY8 342 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 ARL6Q9H0F7 186 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 C11orf68Q9H3H3 251 aaKnown RBP8.18□□□□□ -1.1
RFFL-204ENST00000414419 RPRMQ9NS64 109 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 HLA-DRB4X5D2U9 266 aa8.18□□□□□ -1.1
RFFL-204ENST00000414419 FAM24AA6NFZ4 105 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 INMT-MINDY4F8WBC2 141 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 H3BRN7 92 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 AGPAT2O15120 278 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 CST7O76096 145 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 IGKV3-20P01619 116 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 RLN2P04090 185 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 RPL7P18124 248 aaKnown RBP8.17□□□□□ -1.1
RFFL-204ENST00000414419 C4BPBP20851 252 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 HBG1P69891 147 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 HBG2P69892 147 aa8.17□□□□□ -1.1
RFFL-204ENST00000414419 IFITM3Q01628 133 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 275.3 ms