RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CA1P00915 261 aaPredicted RBP10.86□□□□□ -0.67
LIMS4-201ENST00000413601 DLK1P80370 383 aa10.86□□□□□ -0.67
LIMS4-201ENST00000413601 ACTL10Q5JWF8 245 aa10.86□□□□□ -0.67
LIMS4-201ENST00000413601 C1orf194Q5T5A4 169 aa10.86□□□□□ -0.67
LIMS4-201ENST00000413601 TRPT1Q86TN4 253 aaKnown RBP10.86□□□□□ -0.67
LIMS4-201ENST00000413601 BPIFCQ8NFQ6 507 aa10.86□□□□□ -0.67
LIMS4-201ENST00000413601 OR10P1Q8NGE3 313 aa10.86□□□□□ -0.67
LIMS4-201ENST00000413601 IL17DQ8TAD2 202 aa10.86□□□□□ -0.67
LIMS4-201ENST00000413601 C2orf50Q96LR7 162 aa10.86□□□□□ -0.67
LIMS4-201ENST00000413601 K7EPK0 472 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 L7N2F9 121 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 IL5P05113 134 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 ORM2P19652 201 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 SNRPD3P62318 126 aaKnown RBP10.85□□□□□ -0.67
LIMS4-201ENST00000413601 VAMP2P63027 116 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 EWSR1Q01844 656 aaKnown RBP eCLIP10.85□□□□□ -0.67
LIMS4-201ENST00000413601 ARL16Q0P5N6 197 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 GSG1LQ6UXU4 331 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 CYP2G1PQ6ZSU1 146 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 OR8I2Q8N0Y5 310 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 OR1B1Q8NGR6 318 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 FBXL17Q9UF56 701 aa10.85□□□□□ -0.67
LIMS4-201ENST00000413601 NRARPQ7Z6K4 114 aa10.84□□□□□ -0.67
LIMS4-201ENST00000413601 GATAD1Q8WUU5 269 aa10.84□□□□□ -0.67
LIMS4-201ENST00000413601 RARRES2Q99969 163 aa10.84□□□□□ -0.67
LIMS4-201ENST00000413601 SLC25A22Q9H936 323 aa10.84□□□□□ -0.67
LIMS4-201ENST00000413601 NPVFQ9HCQ7 196 aa10.84□□□□□ -0.67
LIMS4-201ENST00000413601 SEPSECSQ9HD40 501 aaKnown RBP10.84□□□□□ -0.67
LIMS4-201ENST00000413601 DOK5Q9P104 306 aa10.84□□□□□ -0.67
LIMS4-201ENST00000413601 MGAT4CQ9UBM8 478 aa10.84□□□□□ -0.67
LIMS4-201ENST00000413601 ZNF98A6NK75 572 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 FNDC10F2Z333 226 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 GIG44P09565 113 aaPredicted RBP10.83□□□□□ -0.68
LIMS4-201ENST00000413601 BCAP31P51572 246 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 S100A10P60903 97 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 OR11H2Q8NH07 326 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 TMEM147Q9BVK8 224 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 SLC25A32Q9H2D1 315 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 C11orf1Q9H5F2 150 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 GPN1Q9HCN4 374 aaPredicted RBP10.83□□□□□ -0.68
LIMS4-201ENST00000413601 SLC45A2Q9UMX9 530 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 CSMD3Q7Z407 3707 aa10.83□□□□□ -0.68
LIMS4-201ENST00000413601 LINC00869P0C866 280 aa10.82□□□□□ -0.68
LIMS4-201ENST00000413601 SPP1P10451 314 aa10.82□□□□□ -0.68
LIMS4-201ENST00000413601 CAV2P51636 162 aa10.82□□□□□ -0.68
LIMS4-201ENST00000413601 IL15RAQ13261 267 aa10.82□□□□□ -0.68
LIMS4-201ENST00000413601 MORN3Q6PF18 240 aaPredicted RBP10.82□□□□□ -0.68
LIMS4-201ENST00000413601 TEPPQ6URK8 271 aa10.82□□□□□ -0.68
LIMS4-201ENST00000413601 LINC00052Q96N35 136 aa10.82□□□□□ -0.68
LIMS4-201ENST00000413601 FAM24AA6NFZ4 105 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 INMT-MINDY4F8WBC2 141 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 SOCS3O14543 225 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 DEDDO75618 318 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 CST7O76096 145 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 PVALBP20472 110 aaPredicted RBP10.81□□□□□ -0.68
LIMS4-201ENST00000413601 C4BPBP20851 252 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 ID1P41134 155 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 GALR1P47211 349 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 PSMB3P49720 205 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 DEFB1P60022 68 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 SELENOTP62341 195 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 SLC38A11Q08AI6 406 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 RAB32Q13637 225 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 RSG1Q9BU20 258 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 GGACTQ9BVM4 153 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 SCRT1Q9BWW7 348 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 HIGD1AQ9Y241 93 aa10.81□□□□□ -0.68
LIMS4-201ENST00000413601 H3BMM0 161 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 H3BRN7 92 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 HYPMO75409 117 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 SIX6O95475 246 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 OR5G3P0C626 314 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 DEFA1P59665 94 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 DEFA3P59666 94 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 PLP1P60201 277 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 RAP2BP61225 183 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 PMS2P11Q13670 270 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 TMEM217Q8N7C4 229 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 C17orf77Q96MU5 243 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 UHRF2Q96PU4 802 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 SLC25A39Q9BZJ4 359 aaPredicted RBP10.8□□□□□ -0.68
LIMS4-201ENST00000413601 ARL6Q9H0F7 186 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 CLEC5AQ9NY25 188 aa10.8□□□□□ -0.68
LIMS4-201ENST00000413601 STARD9Q9P2P6 4700 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 TENM2Q9NT68 2774 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 ISLRO14498 428 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 GOSR2O14653 212 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 AGPAT2O15120 278 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 PRAF2O60831 178 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 S100A7P31151 101 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 TMEM41BQ5BJD5 291 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 PATE2Q6UY27 113 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 GPR82Q96P67 336 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 MARVELD1Q9BSK0 173 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 SHANK2-AS3Q9BTD1 123 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 LYRM2Q9NU23 88 aaPredicted RBP10.79□□□□□ -0.68
LIMS4-201ENST00000413601 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
LIMS4-201ENST00000413601 LCE6AA0A183 80 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms