RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 EXTL2Q9UBQ6 330 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 CACFD1Q9UGQ2 172 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 PFDN2Q9UHV9 154 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 C14orf166Q9Y224 244 aaKnown RBP8.53□□□□□ -1.04
LIMS2-210ENST00000413578 TMED3Q9Y3Q3 217 aa8.53□□□□□ -1.04
LIMS2-210ENST00000413578 PLAC8L1A1L4L8 177 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 LYRM9A8MSI8 78 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 TNFAIP8O95379 198 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 SULT1A3P0DMM9 295 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 SULT1A4P0DMN0 295 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 GPX4P36969 197 aaPredicted RBP8.52□□□□□ -1.05
LIMS2-210ENST00000413578 SAMD13Q5VXD3 122 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 LGI3Q8N145 548 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 DTD1Q8TEA8 209 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 C7orf50Q9BRJ6 194 aaKnown RBP8.52□□□□□ -1.05
LIMS2-210ENST00000413578 DOK5Q9P104 306 aa8.52□□□□□ -1.05
LIMS2-210ENST00000413578 IGKV1OR2-108A0A075B7D4 117 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 ZFP92A6NM28 416 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 GABARAPH6UMI1 98 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 GABARAPO95166 117 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 PRM2P04554 102 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 TSPOP30536 169 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 ATP5IP56385 69 aaPredicted RBP8.51□□□□□ -1.05
LIMS2-210ENST00000413578 LYZP61626 148 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 SSBP1Q04837 148 aaKnown RBP8.51□□□□□ -1.05
LIMS2-210ENST00000413578 MZT2AQ6P582 158 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 C15orf40Q8WUR7 153 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 TRGV9Q99603 122 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 ATG101Q9BSB4 218 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 MAGT1Q9H0U3 335 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 RBKSQ9H477 322 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 VCX3AQ9NNX9 186 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 RPRMQ9NS64 109 aa8.51□□□□□ -1.05
LIMS2-210ENST00000413578 FAT1Q14517 4588 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 SNRPGP15A8MWD9 76 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 MEOX2P50222 304 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 CCR6P51684 374 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 OR8I2Q8N0Y5 310 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 THAP8Q8NA92 274 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 OR11H7Q8NGC8 314 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 AP3S1Q92572 193 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 MIXL1Q9H2W2 232 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 PRR13Q9NZ81 148 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
LIMS2-210ENST00000413578 ZNF705GA8MUZ8 300 aaPredicted RBP8.49□□□□□ -1.05
LIMS2-210ENST00000413578 ZNF182P17025 639 aaPredicted RBP8.49□□□□□ -1.05
LIMS2-210ENST00000413578 MRPS10P82664 201 aaKnown RBP8.49□□□□□ -1.05
LIMS2-210ENST00000413578 SMCO1Q147U7 214 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 CTF1Q16619 201 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 OR4C16Q8NGL9 310 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 SMIM4Q8WVI0 70 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 SLC35E1Q96K37 410 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 C16orf92Q96LL3 132 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 KRTAP1-5Q9BYS1 174 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 NAA50Q9GZZ1 169 aaKnown RBP8.49□□□□□ -1.05
LIMS2-210ENST00000413578 SLC25A32Q9H2D1 315 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 SLC45A2Q9UMX9 530 aa8.49□□□□□ -1.05
LIMS2-210ENST00000413578 TRAV8-2A0A0B4J237 113 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 DISC1C4P0D8 188 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 M0R2Z0 102 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 PITX3O75364 302 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 INSP01308 110 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 FABP1P07148 127 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 AZU1P20160 251 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 CNN1P51911 297 aaKnown RBP8.48□□□□□ -1.05
LIMS2-210ENST00000413578 B2MP61769 119 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 OR2F1Q13607 317 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 LYZL2Q7Z4W2 148 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 TMEM208Q9BTX3 173 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 SCRT2Q9NQ03 307 aa8.48□□□□□ -1.05
LIMS2-210ENST00000413578 ZNF98A6NK75 572 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 PRSS46E5RG02 174 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 F5H768 121 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 AKAIN1P0CW23 69 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 GALR1P47211 349 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 SPINK13Q1W4C9 94 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 SPATA12Q7Z6I5 190 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 BAP18Q8IXM2 172 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 OR51S1Q8NGJ8 323 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 OR4D5Q8NGN0 318 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 RNF141Q8WVD5 230 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 PPP1R14BQ96C90 147 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 PRRT1Q99946 306 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 RSG1Q9BU20 258 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 KCNIP3Q9Y2W7 256 aa8.47□□□□□ -1.05
LIMS2-210ENST00000413578 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
LIMS2-210ENST00000413578 CBY3A6NI87 242 aa8.46□□□□□ -1.06
LIMS2-210ENST00000413578 DUSP14O95147 198 aaKnown RBP8.46□□□□□ -1.06
LIMS2-210ENST00000413578 NUDT3O95989 172 aa8.46□□□□□ -1.06
LIMS2-210ENST00000413578 CFDP00746 253 aaPredicted RBP8.46□□□□□ -1.06
LIMS2-210ENST00000413578 ATP5G1P05496 136 aa8.46□□□□□ -1.06
LIMS2-210ENST00000413578 ATP5G3P48201 142 aa8.46□□□□□ -1.06
LIMS2-210ENST00000413578 CCL18P55774 89 aa8.46□□□□□ -1.06
LIMS2-210ENST00000413578 KRTAP10-2P60368 255 aa8.46□□□□□ -1.06
LIMS2-210ENST00000413578 FCN2Q15485 313 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms