RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
MRPL55-220ENST00000411464 ABCA13Q86UQ4 5058 aa11.85□□□□□ -0.51
MRPL55-220ENST00000411464 CRYM-AS1A6NIL9 109 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 SNRPGP15A8MWD9 76 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 DISC1C4P0D8 188 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 ISLRO14498 428 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 FABP1P07148 127 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 FAM3BP58499 235 aaPredicted RBP11.84□□□□□ -0.51
MRPL55-220ENST00000411464 SUPT4H1P63272 117 aaKnown RBP11.84□□□□□ -0.51
MRPL55-220ENST00000411464 FAAP20Q6NZ36 180 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 GSG1LQ6UXU4 331 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 PPP1R14BQ96C90 147 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 ATG101Q9BSB4 218 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 TMEM208Q9BTX3 173 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 TMEM56-RWDD3S4R434 201 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 MUC4Q99102 2169 aa11.84□□□□□ -0.51
MRPL55-220ENST00000411464 F6UB75 175 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 GABARAPH6UMI1 98 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 SOCS3O14543 225 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 TNFSF8P32971 234 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 PAX9P55771 341 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 LYZP61626 148 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 ZNF90Q03938 601 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 SSBP1Q04837 148 aaKnown RBP11.83□□□□□ -0.52
MRPL55-220ENST00000411464 SAMD13Q5VXD3 122 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 OR8I2Q8N0Y5 310 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 DTD1Q8TEA8 209 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 IL22RA2Q969J5 263 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 DIRAS2Q96HU8 199 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 SLC35E1Q96K37 410 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 RPRMQ9NS64 109 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 PTTG2Q9NZH5 202 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 GPR132Q9UNW8 380 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 KCNIP3Q9Y2W7 256 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 PKD1P98161 4303 aa11.83□□□□□ -0.52
MRPL55-220ENST00000411464 DYNC1H1Q14204 4646 aaKnown RBP11.82□□□□□ -0.52
MRPL55-220ENST00000411464 C16orf90A8MZG2 172 aa11.82□□□□□ -0.52
MRPL55-220ENST00000411464 S100A5P33763 92 aa11.82□□□□□ -0.52
MRPL55-220ENST00000411464 GPX4P36969 197 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-220ENST00000411464 ATP5IP56385 69 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-220ENST00000411464 GAMTQ14353 236 aa11.82□□□□□ -0.52
MRPL55-220ENST00000411464 DNAH11Q96DT5 4516 aa11.81□□□□□ -0.52
MRPL55-220ENST00000411464 A0A0J9YX75 114 aa11.81□□□□□ -0.52
MRPL55-220ENST00000411464 CCR6P51684 374 aa11.81□□□□□ -0.52
MRPL55-220ENST00000411464 MRPS10P82664 201 aaKnown RBP11.81□□□□□ -0.52
MRPL55-220ENST00000411464 SMCO1Q147U7 214 aa11.81□□□□□ -0.52
MRPL55-220ENST00000411464 RBKSQ9H477 322 aa11.81□□□□□ -0.52
MRPL55-220ENST00000411464 HSPB7Q9UBY9 170 aa11.81□□□□□ -0.52
MRPL55-220ENST00000411464 IGKV1D-37A0A075B6S9 117 aa11.8□□□□□ -0.52
MRPL55-220ENST00000411464 MEOX2P50222 304 aa11.8□□□□□ -0.52
MRPL55-220ENST00000411464 OR2F1Q13607 317 aa11.8□□□□□ -0.52
MRPL55-220ENST00000411464 C16orf92Q96LL3 132 aa11.8□□□□□ -0.52
MRPL55-220ENST00000411464 IGF2BP2-AS1Q96M15 143 aa11.8□□□□□ -0.52
MRPL55-220ENST00000411464 PRRT1Q99946 306 aa11.8□□□□□ -0.52
MRPL55-220ENST00000411464 DOK5Q9P104 306 aa11.8□□□□□ -0.52
MRPL55-220ENST00000411464 CDK2AP2O75956 126 aa11.79□□□□□ -0.52
MRPL55-220ENST00000411464 AKAIN1P0CW23 69 aa11.79□□□□□ -0.52
MRPL55-220ENST00000411464 GALR1P47211 349 aa11.79□□□□□ -0.52
MRPL55-220ENST00000411464 TNP2Q05952 138 aa11.79□□□□□ -0.52
MRPL55-220ENST00000411464 IL18Q14116 193 aa11.79□□□□□ -0.52
MRPL55-220ENST00000411464 CCDC190Q86UF4 302 aa11.79□□□□□ -0.52
MRPL55-220ENST00000411464 PRR13Q9NZ81 148 aa11.79□□□□□ -0.52
MRPL55-220ENST00000411464 A0A0B4J2A0 478 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 FABP12A6NFH5 140 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 LYRM9A8MSI8 78 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 LYZL2Q7Z4W2 148 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 OR51S1Q8NGJ8 323 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 OR4C16Q8NGL9 310 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 C20orf173Q96LM9 149 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 SCGB3A2Q96PL1 93 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 TRGV9Q99603 122 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 SOSTQ9BQB4 213 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 RSG1Q9BU20 258 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 SHPKQ9UHJ6 478 aa11.78□□□□□ -0.52
MRPL55-220ENST00000411464 NBDYA0A0U1RRE5 68 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 DEFB130BP0DP73 79 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 DEFB130AP0DP74 79 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 C6orf223Q8N319 242 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 MAPKAPK5-AS1Q8N8E1 139 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 OR1S1Q8NH92 325 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 SMIM4Q8WVI0 70 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 SLC25A22Q9H936 323 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 V9GYH0 126 aa11.77□□□□□ -0.53
MRPL55-220ENST00000411464 A8MTW9 85 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-220ENST00000411464 F5H768 121 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 DUSP14O95147 198 aaKnown RBP11.76□□□□□ -0.53
MRPL55-220ENST00000411464 NUDT3O95989 172 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 CFDP00746 253 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-220ENST00000411464 INSP01308 110 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 AKR1C4P17516 323 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 CCL18P55774 89 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 B2MP61769 119 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 RAB11AP62491 216 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 SPANXN2Q5MJ10 180 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 GGNBP1Q5YKI7 109 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 AMTNQ6UX39 209 aa11.76□□□□□ -0.53
MRPL55-220ENST00000411464 RABL2AQ9UBK7 228 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms