RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PPP1R14BQ96C90 147 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 GPR146Q96CH1 333 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 RNF125Q96EQ8 232 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 C16orf92Q96LL3 132 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 MGLLQ99685 303 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 AUNIPQ9H7T9 357 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 IFT46Q9NQC8 304 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 RHBDL2Q9NX52 303 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 PPP1R14DQ9NXH3 145 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 MSRB1Q9NZV6 116 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 TPRKBQ9Y3C4 175 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 LY96Q9Y6Y9 160 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 VPS13BQ7Z7G8 4022 aa1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 LRP1Q07954 4544 aaKnown RBP1.61□□□□□ -2.15
RNU4-53P-201ENST00000410828 TRGV2A0A075B6R0 118 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GAGE12BA1L429 117 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 SMIM30A4D0T7 59 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 MEIS3P1A6NDR6 274 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 ZFP92A6NM28 416 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 CEBPZOSA8MTT3 80 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 SNURFLB1AK76 121 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 BOLA2-SMG1P6H3BVE0 249 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GABARAPH6UMI1 98 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 H7BYZ3 331 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 RS1O15537 224 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 PAX4O43316 350 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 PSCAO43653 123 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GAGE7O76087 117 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 NXPH3O95157 252 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GABARAPO95166 117 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 IGKV1-5P01602 117 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 PMP2P02689 132 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GAGE12FP0CL80 117 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GAGE12GP0CL81 117 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GAGE12IP0CL82 117 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 ELK1P19419 428 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 EVI2AP22794 236 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 S100A7P31151 101 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 CDKN1BP46527 198 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GALR1P47211 349 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 UCP3P55916 312 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 SPCS3P61009 180 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 LYZP61626 148 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 RHOBP62745 196 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 KLF9Q13886 244 aaPredicted RBP1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 MRPL23Q16540 153 aaKnown RBP1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 TRIM16LQ309B1 348 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 C2orf83Q53S99 150 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 C22orf42Q6IC83 251 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 PRSS48Q7RTY5 328 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 TMED4Q7Z7H5 227 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 SPARTQ8N0X7 666 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 C10orf126Q8N4M7 172 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 LINC00612Q8N6U2 182 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR52E5Q8NH55 327 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 RNASE11Q8TAA1 199 aaKnown RBP1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 RNASE8Q8TDE3 154 aaKnown RBP1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 RRNAD1Q96FB5 475 aaKnown RBP1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 ACY3Q96HD9 319 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 VSIG2Q96IQ7 327 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 C20orf173Q96LM9 149 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 GPR82Q96P67 336 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 C20orf144Q9BQM9 153 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 RSG1Q9BU20 258 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 SLC25A39Q9BZJ4 359 aaPredicted RBP1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 FXYD6Q9H0Q3 95 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 DUSP21Q9H596 190 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 HEYLQ9NQ87 328 aaPredicted RBP1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 NDUFB11Q9NX14 153 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 FAM30AQ9NZY2 134 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 CACFD1Q9UGQ2 172 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 ICOSQ9Y6W8 199 aa1.6□□□□□ -2.15
RNU4-53P-201ENST00000410828 PKHD1L1Q86WI1 4243 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 TRAV5A0A0B4J249 113 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 A0A0G2JRQ6 117 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 C3orf85A0A1B0GTC6 90 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 LRCOL1A6NCL2 159 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 TMEM127O75204 238 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 ZNF324O75467 553 aaPredicted RBP1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 B3GALNT1O75752 331 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 CFDP00746 253 aaPredicted RBP1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR5AC1P0C628 307 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 PGAM2P15259 253 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 NAT1P18440 290 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 CXCL3P19876 107 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 HLA-DMAP28067 261 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 SDC2P34741 201 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 RCVRNP35243 200 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 HRH1P35367 487 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 ATP5IP56385 69 aaPredicted RBP1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 PIGPP57054 158 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 RND3P61587 244 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 HIST1H1AQ02539 215 aaPredicted RBP1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 ZNF90Q03938 601 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 FGL1Q08830 312 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 DAZ2Q13117 558 aaKnown RBP1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 SLAQ13239 276 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 OR2F1Q13607 317 aa1.59□□□□□ -2.15
RNU4-53P-201ENST00000410828 KIR3DS1Q14943 382 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms