RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ICAM4Q14773 271 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 KHDC3LQ587J8 217 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 Q6YL49 198 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 TEX29Q8N6K0 151 aa4.33□□□□□ -1.72
EPHA4-202ENST00000409854 RNASE8Q8TDE3 154 aaKnown RBP4.33□□□□□ -1.72
EPHA4-202ENST00000409854 F8W735 103 aaPredicted RBP4.32□□□□□ -1.72
EPHA4-202ENST00000409854 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 HSPB1P04792 205 aaKnown RBP4.32□□□□□ -1.72
EPHA4-202ENST00000409854 BCL2P10415 239 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF90Q03938 601 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM88Q6PEY1 159 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 RARRES2Q99969 163 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 VPS25Q9BRG1 176 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 MRPL32Q9BYC8 188 aaKnown RBP4.32□□□□□ -1.72
EPHA4-202ENST00000409854 TNFRSF19Q9NS68 423 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 FUT9Q9Y231 359 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 POLQO75417 2590 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 A0A1W2PPV4 95 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 ZFP92A6NM28 416 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 IGHV4-59P01825 116 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 SFTA3P0C7M3 94 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 GATA2P23769 480 aaPredicted RBP4.32□□□□□ -1.72
EPHA4-202ENST00000409854 PSMB3P49720 205 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 JOSD1Q15040 202 aaPredicted RBP4.32□□□□□ -1.72
EPHA4-202ENST00000409854 LY6EQ16553 131 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 UNQ5815/PRO19632Q6UWF5 114 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 VN1R17PQ8TDU5 208 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 GATAD1Q8WUU5 269 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM37Q8WXS4 190 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 SNHG12Q9BXW3 62 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 MANBALQ9NQG1 85 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 THYN1Q9P016 225 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 ABCA12Q86UK0 2595 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF469Q96JG9 3925 aaPredicted RBP4.32□□□□□ -1.72
EPHA4-202ENST00000409854 AKAP9Q99996 3911 aa4.32□□□□□ -1.72
EPHA4-202ENST00000409854 SH2D7A6NKC9 451 aaPredicted RBP4.31□□□□□ -1.72
EPHA4-202ENST00000409854 K7ERU9 68 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 CD5LO43866 347 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 NDUFB8O95169 186 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 CXorf1O96002 111 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 IFNA1P01562 189 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 IGKV1-17P01599 117 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 AKR1C3P42330 323 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 COL5A1-AS1Q5SY13 56 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 SPATA31B1PQ5VZV4 182 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 PATE2Q6UY27 113 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 ZFP82Q8N141 532 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 OR1L4Q8NGR5 311 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 HIST1H2BAQ96A08 127 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 FAM110AQ9BQ89 295 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 EIF5A2Q9GZV4 153 aaKnown RBP4.31□□□□□ -1.72
EPHA4-202ENST00000409854 TRAV30A0A087WSZ9 112 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 IGHV3-21A0A0B4J1V1 117 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 TRAV41A0A0B4J266 112 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 H3BUA1 57 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 SRP19P09132 144 aaKnown RBP4.31□□□□□ -1.72
EPHA4-202ENST00000409854 PPT1P50897 306 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 CFHR3Q02985 330 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 ECSCRQ19T08 205 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 SLC35E3Q7Z769 313 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 SLC35B3Q9H1N7 401 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 GNG13Q9P2W3 67 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 VAX2Q9UIW0 290 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 VPREB3Q9UKI3 123 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 ARL2-SNX15V9GYD0 113 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 MAP1AP78559 2803 aaPredicted RBP4.31□□□□□ -1.72
EPHA4-202ENST00000409854 SVEP1Q4LDE5 3571 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 G3V318 75 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 HMGB3O15347 200 aaKnown RBP4.31□□□□□ -1.72
EPHA4-202ENST00000409854 TOMM40O96008 361 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 ARL14EPLP0DKL9 152 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 PPIFP30405 207 aaKnown RBP4.31□□□□□ -1.72
EPHA4-202ENST00000409854 MFAP4P55083 255 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 YPEL3P61236 119 aaPredicted RBP4.31□□□□□ -1.72
EPHA4-202ENST00000409854 RANP62826 216 aaKnown RBP4.31□□□□□ -1.72
EPHA4-202ENST00000409854 FAM78BQ5VT40 261 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 MIR17HGQ75NE6 70 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 LINC01551Q86U37 167 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 CBLN2Q8IUK8 224 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF502Q8TBZ5 544 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF503Q96F45 646 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF414Q96IQ9 312 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 C21orf62Q9NYP8 219 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 ITPR3Q14573 2671 aa4.31□□□□□ -1.72
EPHA4-202ENST00000409854 EREGO14944 169 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 TCF21O43680 179 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 OR2J3O76001 311 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 RAB5AP20339 215 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 GCHFRP30047 84 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 NPBWR1P48145 328 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 TIGITQ495A1 244 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 C10orf113Q5VZT2 155 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 NECAP1Q8NC96 275 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 FAM167A-AS1Q96KT0 104 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-202ENST00000409854 SLC25A2Q9BXI2 301 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 TECRQ9NZ01 308 aaKnown RBP4.3□□□□□ -1.72
EPHA4-202ENST00000409854 FBXL7Q9UJT9 491 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms