RNA–Protein interactions for RNA: ENST00000409556.5

KDM3A-203, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KDM3A, Length 4,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-203ENST00000409556 PCDH15Q96QU1 1955 aa12.16□□□□□ -0.46
KDM3A-203ENST00000409556 MMP23AO75900 390 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 ZNF688P0C7X2 276 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 STAG3L2P0CL84 134 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 STAG3L3P0CL85 134 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 MBD3L1Q8WWY6 194 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 CTSZQ9UBR2 303 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 ANAPC10Q9UM13 185 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 TMEM262E9PQX1 116 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 OVOL3O00110 214 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 WISP2O76076 250 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 NDPQ00604 133 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 C11orf53Q8IXP5 236 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 ZNF502Q8TBZ5 544 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 TBX15Q96SF7 602 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.15□□□□□ -0.46
KDM3A-203ENST00000409556 CNTFRP26992 372 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 GPR61Q9BZJ8 451 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 DAZ1Q9NQZ3 744 aaKnown RBP12.15□□□□□ -0.46
KDM3A-203ENST00000409556 SOX21Q9Y651 276 aaPredicted RBP12.15□□□□□ -0.46
KDM3A-203ENST00000409556 SELENOKQ9Y6D0 94 aa12.15□□□□□ -0.46
KDM3A-203ENST00000409556 IGHV4-61A0A0C4DH41 118 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 MUC21A0A0G2JKD1 596 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 MUC21A0A140T8X8 626 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 REC114Q7Z4M0 266 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 RHPN1-AS1Q9BWJ2 59 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 A0A1B0GW15 77 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 LEPROTL1O95214 131 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 IGHV4-39P01824 125 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 VSIRQ9H7M9 311 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 TOMM40O96008 361 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 SYNJ2BPP57105 145 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 FBLN7Q53RD9 439 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 VN1R17PQ8TDU5 208 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 ATRXP46100 2492 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 CSPG4Q6UVK1 2322 aa12.14□□□□□ -0.47
KDM3A-203ENST00000409556 ZNF324O75467 553 aaPredicted RBP12.13□□□□□ -0.47
KDM3A-203ENST00000409556 IGHV4-30-2A0A087WSY4 118 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 FNDC10F2Z333 226 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 FGF16O43320 207 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 SRSF9Q13242 221 aaKnown RBP eCLIP12.13□□□□□ -0.47
KDM3A-203ENST00000409556 IL17RELQ6ZVW7 336 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 Q8NFD4 153 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 OR1N2Q8NGR9 330 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 OR10AG1Q8NH19 301 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 MIEN1Q9BRT3 115 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 TMEM14BQ9NUH8 114 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 KIAA1549LQ6ZVL6 1849 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 TMEM136Q6ZRR5 245 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 G3V318 75 aa12.13□□□□□ -0.47
KDM3A-203ENST00000409556 TCF21O43680 179 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 IGKV3OR2-268A0A0C4DH90 116 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 OR11H12B2RN74 326 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 KRTAP27-1Q3LI81 207 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 DIRC3C9JPN6 131 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 M0R3E3 92 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 CBLN1P23435 193 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 SPATA31B1PQ5VZV4 182 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 SEPSECSQ9HD40 501 aaKnown RBP12.12□□□□□ -0.47
KDM3A-203ENST00000409556 NDUFA4L2Q9NRX3 87 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 VAMP3Q15836 100 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 TMEM249Q2WGJ8 235 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 PRELID3AQ96N28 172 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 HSPB9Q9BQS6 159 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 TMEM131Q92545 1883 aa12.12□□□□□ -0.47
KDM3A-203ENST00000409556 FOXA3P55318 350 aaPredicted RBP12.11□□□□□ -0.47
KDM3A-203ENST00000409556 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
KDM3A-203ENST00000409556 LHBP01229 141 aa12.11□□□□□ -0.47
KDM3A-203ENST00000409556 ZNF134P52741 427 aa12.11□□□□□ -0.47
KDM3A-203ENST00000409556 CARHSP1Q9Y2V2 147 aaKnown RBP12.11□□□□□ -0.47
KDM3A-203ENST00000409556 MLANAQ16655 118 aa12.11□□□□□ -0.47
KDM3A-203ENST00000409556 C10orf105Q8TEF2 133 aa12.11□□□□□ -0.47
KDM3A-203ENST00000409556 WFDC12Q8WWY7 111 aa12.11□□□□□ -0.47
KDM3A-203ENST00000409556 NDUFB8O95169 186 aa12.11□□□□□ -0.47
KDM3A-203ENST00000409556 RPL23P62829 140 aaKnown RBP12.11□□□□□ -0.47
KDM3A-203ENST00000409556 TMEM101Q96IK0 257 aa12.11□□□□□ -0.47
KDM3A-203ENST00000409556 HOXA3O43365 443 aaPredicted RBP12.1□□□□□ -0.47
KDM3A-203ENST00000409556 EXOC3-AS1Q8N2X6 119 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 RPP25LQ8N5L8 163 aaKnown RBP12.1□□□□□ -0.47
KDM3A-203ENST00000409556 ZNF106Q9H2Y7 1883 aaKnown RBP12.1□□□□□ -0.47
KDM3A-203ENST00000409556 HIGD1CA8MV81 97 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 C10orf142B7Z368 130 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 GEMIN7Q9H840 131 aaKnown RBP12.1□□□□□ -0.47
KDM3A-203ENST00000409556 SRCAPQ6ZRS2 3230 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 IFITM10A6NMD0 228 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 NRGNQ92686 78 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
KDM3A-203ENST00000409556 PTPRSQ13332 1948 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 ALPK3Q96L96 1907 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 M0R143 59 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 C8orf31Q8N9H6 132 aa12.1□□□□□ -0.47
KDM3A-203ENST00000409556 LINC01619G3V211 115 aa12.09□□□□□ -0.47
KDM3A-203ENST00000409556 SPRNQ5BIV9 151 aa12.09□□□□□ -0.47
KDM3A-203ENST00000409556 PRO1933Q9H354 126 aa12.09□□□□□ -0.47
KDM3A-203ENST00000409556 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
KDM3A-203ENST00000409556 FREM1Q5H8C1 2179 aa12.09□□□□□ -0.47
KDM3A-203ENST00000409556 IGKV2-40A0A087WW87 121 aaPredicted RBP12.09□□□□□ -0.47
KDM3A-203ENST00000409556 IGKV2D-40P01614 121 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms