RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 INS-IGF2F8WCM5 200 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 H0YJW9 148 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 CXorf1O96002 111 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 RPL29P47914 159 aaKnown RBP9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 CFHR3Q02985 330 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 FHL3Q13643 280 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 EBI3Q14213 229 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 ADIRFQ15847 76 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 C2orf83Q53S99 150 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 GCSAMLQ5JQS6 135 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 MIC13Q5XKP0 118 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 IQCF2Q8IXL9 164 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 Q8N6K4 173 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 OR4A5Q8NH83 315 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 EAF1Q96JC9 268 aaPredicted RBP9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 FAM210BQ96KR6 192 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 AMMECR1Q9Y4X0 333 aaPredicted RBP9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 URGCP-MRPS24S4R325 110 aa9.81□□□□□ -0.84
CHRNA1-205ENST00000409542 TEX50A0A1B0GTY4 177 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 NCBP2LA6PVI3 153 aaKnown RBP9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 SRRM4A7MD48 611 aaKnown RBP9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 IGKV1-16P04430 117 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 SAA1P0DJI8 122 aaPredicted RBP9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 REG1BP48304 166 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 ZNF137PP52743 207 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 B2MP61769 119 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 FOXE3Q13461 319 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 ADAMTSL5Q6ZMM2 481 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 OR11H1Q8NG94 326 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 OR1L8Q8NGR8 309 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 ANAPC16Q96DE5 110 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 HSPB9Q9BQS6 159 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 PYGO2Q9BRQ0 406 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 KRTAP17-1Q9BYP8 105 aa9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 PLECQ15149 4684 aaKnown RBP9.8□□□□□ -0.84
CHRNA1-205ENST00000409542 IGHV1-3A0A0C4DH29 117 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 ELANEP08246 267 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 FRMD6-AS1P0C7T7 363 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 HOXA5P20719 270 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 RHOBP62745 196 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 PRR20EP86478 221 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 PRR20CP86479 221 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 PRR20DP86480 221 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 PRR20BP86481 221 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 PRR20AP86496 221 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 MOB3BQ86TA1 216 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 PDPNQ86YL7 162 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 TGIF2LXQ8IUE1 241 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 STPG3Q8N7X2 389 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 C4orf3Q8WVX3 66 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 GNB4Q9HAV0 340 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 DOK5Q9P104 306 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 H7BYZ3 331 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 S100A9P06702 114 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 PFN1P07737 140 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 ARL14EPLP0DKL9 152 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 RNASE2P10153 161 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 DEFA4P12838 97 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 MYOD1P15172 320 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 NPPCP23582 126 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 S100A12P80511 92 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 VSTM2AQ8TAG5 236 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 TMEM167AQ8TBQ9 72 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 ST6GALNAC6Q969X2 333 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 SLC35E1Q96K37 410 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 HARBI1Q96MB7 349 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 NABP2Q9BQ15 211 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 HINT2Q9BX68 163 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 KLK15Q9H2R5 256 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 SLC45A2Q9UMX9 530 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 ARL2-SNX15V9GYD0 113 aa9.79□□□□□ -0.84
CHRNA1-205ENST00000409542 A0A1W2PN81 502 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 CLN5O75503 358 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 MT-CO2P00403 227 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 IGHG4P01861 327 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 LINC00869P0C866 280 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 S100PP25815 95 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 PSMB8P28062 276 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 GCHFRP30047 84 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 CHRNA7P36544 502 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 GNB1P62873 340 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 OR10X1Q8NGY0 326 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 MYOZ3Q8TDC0 251 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 ABHD5Q8WTS1 349 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 FLYWCH2Q96CP2 140 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 OR5B12Q96R08 314 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 SRD5A3Q9H8P0 318 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 NDUFA4L2Q9NRX3 87 aa9.78□□□□□ -0.84
CHRNA1-205ENST00000409542 PHOX2AO14813 284 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST1H2BKO60814 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST1H2BJP06899 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST1H2BOP23527 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 IL3RAP26951 378 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 HIST1H2BBP33778 126 aa9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 GPX4P36969 197 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-205ENST00000409542 ATP5G3P48201 142 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms