RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 UBE2L3P68036 154 aaKnown RBP10.9□□□□□ -0.66
GPNMB-203ENST00000409458 SOHLH1Q5JUK2 328 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 CST9LP1Q5W188 147 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 FAM90A2PQ658T7 463 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 LEMD1Q68G75 181 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 C10orf99Q6UWK7 81 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 ZNF329Q86UD4 541 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 SVBPQ8N300 66 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 SUN5Q8TC36 379 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 PAXXQ9BUH6 204 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 TMEM160Q9NX00 188 aa10.9□□□□□ -0.66
GPNMB-203ENST00000409458 PUS1Q9Y606 427 aaKnown RBP eCLIP10.9□□□□□ -0.66
GPNMB-203ENST00000409458 SONP18583 2426 aaKnown RBP10.89□□□□□ -0.67
GPNMB-203ENST00000409458 IGHV3-35A0A0C4DH35 117 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 FAM74A7A6NL05 159 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 H3BRN7 92 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 LY6G6DO95868 133 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 FXYD5Q96DB9 178 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 OR51M1Q9H341 326 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 GNB4Q9HAV0 340 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 ESM1Q9NQ30 184 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 GAR1Q9NY12 217 aaKnown RBP10.89□□□□□ -0.67
GPNMB-203ENST00000409458 PPP5D1E7EU14 171 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 GP9P14770 177 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 ZNF600Q6ZNG1 722 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 USMG5Q96IX5 58 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
GPNMB-203ENST00000409458 CUBNO60494 3623 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 TRBV12-3P01733 135 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 IGHV3-11P01762 117 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 IGHG4P01861 327 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 PSMB8P28062 276 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 RAB9AP51151 201 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 Q8N2B8 174 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 ATP6V0BQ99437 205 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 ARL2-SNX15V9GYD0 113 aa10.88□□□□□ -0.67
GPNMB-203ENST00000409458 IGHV3OR16-8A0A075B7F1 116 aa10.87□□□□□ -0.67
GPNMB-203ENST00000409458 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
GPNMB-203ENST00000409458 NDUFS6O75380 124 aaKnown RBP10.87□□□□□ -0.67
GPNMB-203ENST00000409458 SNRPCP09234 159 aaKnown RBP10.87□□□□□ -0.67
GPNMB-203ENST00000409458 NPPCP23582 126 aa10.87□□□□□ -0.67
GPNMB-203ENST00000409458 TOMM20LQ6UXN7 152 aa10.87□□□□□ -0.67
GPNMB-203ENST00000409458 STXBP6Q8NFX7 210 aa10.87□□□□□ -0.67
GPNMB-203ENST00000409458 NKX6-2Q9C056 277 aaPredicted RBP10.87□□□□□ -0.67
GPNMB-203ENST00000409458 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.86□□□□□ -0.67
GPNMB-203ENST00000409458 GGTLC3B5MD39 225 aa10.86□□□□□ -0.67
GPNMB-203ENST00000409458 ARL3P36405 182 aa10.86□□□□□ -0.67
GPNMB-203ENST00000409458 CLRN3Q8NCR9 226 aa10.86□□□□□ -0.67
GPNMB-203ENST00000409458 A0A0G2JLM5 398 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 SCO2A0A1W2PP80 73 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 FAM181BA6NEQ2 426 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 F6UZH7 168 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 H3BQ15 152 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 PDE6DO43924 150 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 SNAPINO95295 136 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 SRD5A1P18405 259 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 ZNF674Q2M3X9 581 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 OR4X2Q8NGF9 303 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 RPUSD4Q96CM3 377 aaKnown RBP10.85□□□□□ -0.67
GPNMB-203ENST00000409458 TXNDC17Q9BRA2 123 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 PARLQ9H300 379 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 SERTAD4Q9NUC0 356 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 TMEM14CQ9P0S9 112 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 A0A1W2PRE2 83 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 TMEM89A2RUT3 159 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 ZNF98A6NK75 572 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 BMPR1BO00238 502 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 SLC35B1P78383 322 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
GPNMB-203ENST00000409458 SCGB2A2Q13296 93 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 AWAT1Q58HT5 328 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 ZNF343Q6P1L6 599 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 BLNKQ8WV28 456 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 C20orf24Q9BUV8 137 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 RABAC1Q9UI14 185 aa10.85□□□□□ -0.67
GPNMB-203ENST00000409458 CLPSL1A2RUU4 121 aa10.84□□□□□ -0.67
GPNMB-203ENST00000409458 H3BTX0 84 aa10.84□□□□□ -0.67
GPNMB-203ENST00000409458 NIPSNAP3BQ9BS92 247 aa10.84□□□□□ -0.67
GPNMB-203ENST00000409458 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
GPNMB-203ENST00000409458 ZNF727A8MUV8 499 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 CLDN34H7C241 214 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 M0R036 132 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 MRPS12O15235 138 aaKnown RBP10.83□□□□□ -0.68
GPNMB-203ENST00000409458 RPLP1P05386 114 aaKnown RBP10.83□□□□□ -0.68
GPNMB-203ENST00000409458 FOXE3Q13461 319 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 TEX38Q6PEX7 206 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 Q6ZSV7 163 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 Q71RC1 249 aaPredicted RBP10.83□□□□□ -0.68
GPNMB-203ENST00000409458 SMIM7Q9BQ49 75 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 DERL1Q9BUN8 251 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 CDC42EP3Q9UKI2 254 aa10.83□□□□□ -0.68
GPNMB-203ENST00000409458 NDUFB4O95168 129 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 NBEAP1P0C6P0 100 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 IGLC2P0DOY2 106 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 S100A7AQ86SG5 101 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 BPIFA4PQ86YQ2 179 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 MYOZ3Q8TDC0 251 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 C11orf52Q96A22 123 aa10.82□□□□□ -0.68
GPNMB-203ENST00000409458 OR5B12Q96R08 314 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms