RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PLXNA4Q9HCM2 1894 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 KIF26AQ9ULI4 1882 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-203ENST00000409161 EVI2AP22794 236 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 HAPLN4Q86UW8 402 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 NEUROG3Q9Y4Z2 214 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 TRGV9Q99603 122 aa10.13□□□□□ -0.79
SHANK2-203ENST00000409161 IGKV3D-20A0A0C4DH25 116 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 RAMP3O60896 148 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 SPSB3Q6PJ21 355 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 WFDC6Q9BQY6 131 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 COLCA2A8K830 154 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 GNG5P63218 68 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 ERCC8Q13216 396 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 EIF4EBP2Q13542 120 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-203ENST00000409161 D6R8Y8 96 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 PRTN3P24158 256 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 MORN2Q502X0 79 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 DSCAML1Q8TD84 2053 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 IGHV3-66A0A0C4DH42 116 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 FNDC10F2Z333 226 aa10.12□□□□□ -0.79
SHANK2-203ENST00000409161 KIAA1549LQ6ZVL6 1849 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 IGHV2OR16-5A0A0B4J2B6 119 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 ZNF415Q09FC8 603 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 CHCHD5Q9BSY4 110 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 TMEM133Q9H2Q1 129 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 DPH3P1Q9H4G8 78 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 CRYBA2P53672 197 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 BSPH1Q075Z2 132 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 LILRA1O75019 489 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 IFITM1P13164 125 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 MUC21A0A0G2JKD1 596 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 MUC21A0A140T8X8 626 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 CD300EQ496F6 205 aaPredicted RBP10.11□□□□□ -0.79
SHANK2-203ENST00000409161 MUC21Q5SSG8 566 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 GAGE2AQ6NT46 116 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 CECR9P0C854 216 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 PCOLCEQ15113 449 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 TIMM21Q9BVV7 248 aa10.11□□□□□ -0.79
SHANK2-203ENST00000409161 OR13A1Q8NGR1 328 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 IGHV3-49A0A0A0MS15 119 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 TMEM258P61165 79 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 UTF1Q5T230 341 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 ADAMTSL5Q6ZMM2 481 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 PAX8Q06710 450 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 SOCS3O14543 225 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 BTCP35070 178 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 PPDPFLQ8WWR9 84 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 PRR14LQ5THK1 2151 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 CEP192Q8TEP8 1941 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 IGHV3-35A0A0C4DH35 117 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 PROB1E7EW31 1015 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 ID3Q02535 119 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 C1QL2Q7Z5L3 287 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 LINC00477Q96M19 166 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 NRTNQ99748 197 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 CHCHD2Q9Y6H1 151 aaPredicted RBP10.1□□□□□ -0.79
SHANK2-203ENST00000409161 PDE6HQ13956 83 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 LINC01551Q86U37 167 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 CELA2AP08217 269 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 SRD5A1P18405 259 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 LY6G6FQ5SQ64 297 aa10.1□□□□□ -0.79
SHANK2-203ENST00000409161 A0A087WX48 190 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 A6NNC1 897 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 TRACP01848 142 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 RPL36AP83881 106 aaKnown RBP10.09□□□□□ -0.79
SHANK2-203ENST00000409161 RPL36ALQ969Q0 106 aaKnown RBP10.09□□□□□ -0.79
SHANK2-203ENST00000409161 IGHV3-23P01764 117 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 DUTP33316 252 aaKnown RBP10.09□□□□□ -0.79
SHANK2-203ENST00000409161 NUP210Q8TEM1 1887 aaPredicted RBP10.09□□□□□ -0.79
SHANK2-203ENST00000409161 ADAMTS9Q9P2N4 1935 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 PRSS22Q9GZN4 317 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 C1QTNF4Q9BXJ3 329 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 IL18BPO95998 194 aa10.09□□□□□ -0.79
SHANK2-203ENST00000409161 UBL5Q9BZL1 73 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 A0A087X0K7 114 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 LINC00114Q6XXX2 140 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 C17orf100A8MU93 164 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 ZNF138P52744 262 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 GAGE1Q13065 139 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 NUP35Q8NFH5 326 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 RNF5Q99942 180 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 SRSF8Q9BRL6 282 aaKnown RBP10.08□□□□□ -0.8
SHANK2-203ENST00000409161 WDR90Q96KV7 1748 aa10.08□□□□□ -0.8
SHANK2-203ENST00000409161 LOC101059948A0A1B0GTJ6 334 aa10.07□□□□□ -0.8
SHANK2-203ENST00000409161 SMAD7O15105 426 aaKnown RBP10.07□□□□□ -0.8
SHANK2-203ENST00000409161 SAP25Q8TEE9 199 aa10.07□□□□□ -0.8
SHANK2-203ENST00000409161 MBNL3Q9NUK0 354 aaKnown RBP10.07□□□□□ -0.8
SHANK2-203ENST00000409161 LAIR2Q6ISS4 152 aa10.07□□□□□ -0.8
SHANK2-203ENST00000409161 SRSF3P84103 164 aaKnown RBP10.07□□□□□ -0.8
SHANK2-203ENST00000409161 WDR83OSQ9Y284 106 aa10.07□□□□□ -0.8
SHANK2-203ENST00000409161 SPATA31B1PQ5VZV4 182 aa10.07□□□□□ -0.8
SHANK2-203ENST00000409161 SUMO4Q6EEV6 95 aa10.07□□□□□ -0.8
SHANK2-203ENST00000409161 ANAPC10Q9UM13 185 aa10.07□□□□□ -0.8
SHANK2-203ENST00000409161 SS18Q15532 418 aa10.06□□□□□ -0.8
SHANK2-203ENST00000409161 OOSP1A8MZH6 123 aa10.06□□□□□ -0.8
SHANK2-203ENST00000409161 LY6G5BQ8NDX9 201 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms