RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 ZNF600Q6ZNG1 722 aa14.82□□□□□ -0.04
USP39-202ENST00000409025 NECAP1Q8NC96 275 aa14.82□□□□□ -0.04
USP39-202ENST00000409025 SFRP2Q96HF1 295 aa14.82□□□□□ -0.04
USP39-202ENST00000409025 FAM210BQ96KR6 192 aa14.82□□□□□ -0.04
USP39-202ENST00000409025 TRAV41A0A0B4J266 112 aa14.82□□□□□ -0.04
USP39-202ENST00000409025 PFN1P07737 140 aaKnown RBP14.82□□□□□ -0.04
USP39-202ENST00000409025 MYCNOSP40205 109 aa14.82□□□□□ -0.04
USP39-202ENST00000409025 CRIP2P52943 208 aaPredicted RBP14.82□□□□□ -0.04
USP39-202ENST00000409025 C1QL4Q86Z23 238 aa14.82□□□□□ -0.04
USP39-202ENST00000409025 TRBV24-1A0A075B6N3 115 aa14.81□□□□□ -0.04
USP39-202ENST00000409025 CTSGP08311 255 aa14.81□□□□□ -0.04
USP39-202ENST00000409025 ZNF502Q8TBZ5 544 aa14.81□□□□□ -0.04
USP39-202ENST00000409025 PEX7O00628 323 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 IGHV4-31P0DP07 118 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 HIST1H1EP10412 219 aaKnown RBP14.8□□□□□ -0.04
USP39-202ENST00000409025 SRP14P37108 136 aaKnown RBP14.8□□□□□ -0.04
USP39-202ENST00000409025 CNN1P51911 297 aaKnown RBP14.8□□□□□ -0.04
USP39-202ENST00000409025 BPIFA4PQ86YQ2 179 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 GAR1Q9NY12 217 aaKnown RBP14.8□□□□□ -0.04
USP39-202ENST00000409025 ANKRD17O75179 2603 aaKnown RBP14.8□□□□□ -0.04
USP39-202ENST00000409025 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.8□□□□□ -0.042e-7■■■■■ 31.3
USP39-202ENST00000409025 CRYBG3Q68DQ2 2970 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 PGPA6NDG6 321 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 SLC25A5P05141 298 aaKnown RBP14.8□□□□□ -0.04
USP39-202ENST00000409025 TAS2R60P59551 318 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 USF2Q15853 346 aaPredicted RBP14.8□□□□□ -0.04
USP39-202ENST00000409025 TEX38Q6PEX7 206 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 MBD6Q96DN6 1003 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 RNF24Q9Y225 148 aa14.8□□□□□ -0.04
USP39-202ENST00000409025 K7EN84 100 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 C19orf54Q5BKX5 351 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 KCNIP4Q6PIL6 250 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 OR10G8Q8NGN5 311 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 EEF1AKMT3Q96AZ1 226 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 MS4A10Q96PG2 267 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 CHRDL1Q9BU40 450 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 CDC42EP3Q9UKI2 254 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 EPDR1Q9UM22 224 aa14.79□□□□□ -0.04
USP39-202ENST00000409025 GPR183P32249 361 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 PRSS57Q6UWY2 283 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 OR4F17Q8NGA8 305 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 Q9H3A6 140 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 BIN3Q9NQY0 253 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 ZNF586Q9NXT0 402 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 FBN2P35556 2912 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 ZNF98A6NK75 572 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 H3BTX0 84 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 TGOLN2O43493 480 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 IGHG2P01859 326 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 IGF1P05019 195 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 ADMP35318 185 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 IGF2BP2-AS1Q96M15 143 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 Q96MF0 132 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 IMMP2LQ96T52 175 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 PYGO2Q9BRQ0 406 aa14.78□□□□□ -0.04
USP39-202ENST00000409025 VPS13CQ709C8 3753 aa14.77□□□□□ -0.04
USP39-202ENST00000409025 TRBV7-1A0A0A6YYK4 115 aa14.77□□□□□ -0.04
USP39-202ENST00000409025 CLEC3BP05452 202 aa14.77□□□□□ -0.04
USP39-202ENST00000409025 DEFB112Q30KQ8 113 aa14.77□□□□□ -0.04
USP39-202ENST00000409025 C5orf17Q8NAS9 161 aa14.77□□□□□ -0.04
USP39-202ENST00000409025 LINC00527Q9UJ94 153 aa14.77□□□□□ -0.04
USP39-202ENST00000409025 GNG5P63218 68 aa14.76□□□□□ -0.05
USP39-202ENST00000409025 ATP5G2Q06055 141 aa14.76□□□□□ -0.05
USP39-202ENST00000409025 OTORQ9NRC9 128 aa14.76□□□□□ -0.05
USP39-202ENST00000409025 FAM223BA6NKX1 122 aa14.76□□□□□ -0.05
USP39-202ENST00000409025 S100A7P31151 101 aa14.76□□□□□ -0.05
USP39-202ENST00000409025 FAM223AQ8IWN6 122 aa14.76□□□□□ -0.05
USP39-202ENST00000409025 BCL6BQ8N143 479 aaPredicted RBP14.76□□□□□ -0.05
USP39-202ENST00000409025 LINC00479Q96M42 142 aa14.76□□□□□ -0.05
USP39-202ENST00000409025 RABAC1Q9UI14 185 aa14.76□□□□□ -0.05
USP39-202ENST00000409025 CR1P17927 2039 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 A0A1W2PPQ1 181 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 GGCTO75223 188 aaKnown RBP14.75□□□□□ -0.05
USP39-202ENST00000409025 S100A6P06703 90 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 ERVFC1-1P60608 527 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 OR5I1Q13606 314 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 CLEC19AQ6UXS0 136 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 TMEM190Q8WZ59 177 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 CCDC140Q96MF4 163 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 ATG101Q9BSB4 218 aa14.75□□□□□ -0.05
USP39-202ENST00000409025 SAV1Q9H4B6 383 aaPredicted RBP14.75□□□□□ -0.05
USP39-202ENST00000409025 TRBV19A0A075B6N1 114 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 BMPR1BO00238 502 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 GCGP01275 180 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 IGLV2-8P01709 118 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 IGLC2P0DOY2 106 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 UBE2G1P62253 170 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 TMEM183BQ1AE95 376 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 PSMG3-AS1Q96PY0 264 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 GNB4Q9HAV0 340 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 RPH3ALQ9UNE2 315 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 TRAV34A0A0B4J273 112 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 MRPS12O15235 138 aaKnown RBP14.74□□□□□ -0.05
USP39-202ENST00000409025 TRGV3P03979 118 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 S100A9P06702 114 aaKnown RBP14.74□□□□□ -0.05
USP39-202ENST00000409025 MGST1P10620 155 aaKnown RBP14.74□□□□□ -0.05
USP39-202ENST00000409025 BLCAPP62952 87 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 FOXL1Q12952 345 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 BTF3L4Q96K17 158 aa14.74□□□□□ -0.05
USP39-202ENST00000409025 ATP6V0BQ99437 205 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms