RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 CR1LQ2VPA4 569 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 RASL11AQ6T310 242 aa13.12□□□□□ -0.31
COL4A3BP-204ENST00000405807 GGTLC3B5MD39 225 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 MGST3O14880 152 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 IGHV3-13P01766 116 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 DIAPH2-AS1Q14236 149 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 FAM214BQ7L5A3 538 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 TDHQ8IZJ6 230 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 MAFAQ8NHW3 353 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 ZNF503Q96F45 646 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 TRBV20-1A0A075B6N2 111 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 TRGV5A0A0B4J1U4 118 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 TM4SF20Q53R12 229 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 IGF2BP2-AS1Q96M15 143 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 MCRIP2Q9BUT9 160 aaKnown RBP13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 DUSP13Q9UII6 198 aa13.11□□□□□ -0.31
COL4A3BP-204ENST00000405807 MZT1Q08AG7 82 aa13.1□□□□□ -0.31
COL4A3BP-204ENST00000405807 WIPF2Q8TF74 440 aaPredicted RBP13.1□□□□□ -0.31
COL4A3BP-204ENST00000405807 SPRY4Q9C004 299 aa13.1□□□□□ -0.31
COL4A3BP-204ENST00000405807 TNFRSF19Q9NS68 423 aa13.1□□□□□ -0.31
COL4A3BP-204ENST00000405807 LINC00173Q6ZV60 143 aa13.1□□□□□ -0.31
COL4A3BP-204ENST00000405807 ZADH2Q8N4Q0 377 aa13.1□□□□□ -0.31
COL4A3BP-204ENST00000405807 TET2Q6N021 2002 aaPredicted RBP13.1□□□□□ -0.31
COL4A3BP-204ENST00000405807 FHL3Q13643 280 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 SPRR3Q9UBC9 169 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 FZR1Q9UM11 496 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 CENPVL3A0A0U1RRI6 287 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 APOMO95445 188 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 SP9P0CG40 484 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 ACP1P24666 158 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 PEAR1Q5VY43 1037 aaPredicted RBP13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 MDS2Q8NDY4 140 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 C18orf15Q96N68 181 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 SIGLEC8Q9NYZ4 499 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 IDI2-AS1Q9NZ38 188 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 PRNDQ9UKY0 176 aa13.09□□□□□ -0.31
COL4A3BP-204ENST00000405807 IGKV1D-17A0A075B6S4 117 aa13.08□□□□□ -0.31
COL4A3BP-204ENST00000405807 H3BMG7 143 aa13.08□□□□□ -0.31
COL4A3BP-204ENST00000405807 SMIM13P0DJ93 91 aa13.08□□□□□ -0.31
COL4A3BP-204ENST00000405807 C8orf88P0DMB2 117 aa13.08□□□□□ -0.31
COL4A3BP-204ENST00000405807 GLRXP35754 106 aa13.08□□□□□ -0.31
COL4A3BP-204ENST00000405807 RPL8P62917 257 aaKnown RBP13.08□□□□□ -0.31
COL4A3BP-204ENST00000405807 C8orf46Q8TAG6 207 aa13.08□□□□□ -0.31
COL4A3BP-204ENST00000405807 SH2D7A6NKC9 451 aaPredicted RBP13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 IGKV3-15P01624 115 aa13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 FOXI1Q12951 378 aa13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 C1orf229Q6ZS94 237 aaPredicted RBP13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 Q6ZT83 130 aa13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 INSIG2Q9Y5U4 225 aa13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 TRIB1Q96RU8 372 aa13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 CALYQ9NYX4 217 aa13.08□□□□□ -0.32
COL4A3BP-204ENST00000405807 C21orf140B9A014 251 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 NDUFV3P56181 108 aaKnown RBP13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 FAM162BQ5T6X4 162 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 GTSF1Q8WW33 167 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 ADTRPQ96IZ2 230 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 SLC25A33Q9BSK2 321 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 PRRC2CQ9Y520 2896 aaKnown RBP13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 IGKV1OR2-108A0A075B7D4 117 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 KLF5Q13887 457 aaPredicted RBP13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 FAM120AOSQ5T036 256 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 FAM168AQ92567 244 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 SAP30LQ9HAJ7 183 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 RAB9BQ9NP90 201 aa13.07□□□□□ -0.32
COL4A3BP-204ENST00000405807 SRRM5B3KS81 715 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 MYOD1P15172 320 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 MFAP2P55001 183 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 PRCDQ00LT1 54 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 POU2AF1Q16633 256 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 CT45A1Q5HYN5 189 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 FAM231DQ6ZW35 169 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 SSX8Q7RTT4 187 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 CT45A3Q8NHU0 189 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 SAA2P0DJI9 122 aaPredicted RBP13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 GAGE13Q4V321 117 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 MOB3BQ86TA1 216 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 LEAP2Q969E1 77 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 PRELID3AQ96N28 172 aa13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 SSBP3Q9BWW4 388 aaPredicted RBP13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 MRPL32Q9BYC8 188 aaKnown RBP13.06□□□□□ -0.32
COL4A3BP-204ENST00000405807 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
COL4A3BP-204ENST00000405807 LCNL1Q6ZST4 164 aa13.05□□□□□ -0.32
COL4A3BP-204ENST00000405807 NHLRC2Q8NBF2 726 aa13.05□□□□□ -0.32
COL4A3BP-204ENST00000405807 C2orf83Q53S99 150 aa13.05□□□□□ -0.32
COL4A3BP-204ENST00000405807 MBNL2Q5VZF2 373 aaKnown RBP13.05□□□□□ -0.32
COL4A3BP-204ENST00000405807 ZNRF1Q8ND25 227 aa13.05□□□□□ -0.32
COL4A3BP-204ENST00000405807 ZNF355PQ9NSJ1 428 aa13.05□□□□□ -0.32
COL4A3BP-204ENST00000405807 LEPROTL1O95214 131 aa13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 FGF6P10767 208 aa13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 ZNF502Q8TBZ5 544 aa13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 AMMECR1Q9Y4X0 333 aaPredicted RBP13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 ZFHX4Q86UP3 3567 aa13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 CECR9P0C854 216 aa13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 PPIFP30405 207 aaKnown RBP13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 UBE2L3P68036 154 aaKnown RBP13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 MEIG1Q5JSS6 88 aa13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 NUP35Q8NFH5 326 aa13.04□□□□□ -0.32
COL4A3BP-204ENST00000405807 IGHV3OR15-7A0A075B7D8 119 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms