RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 SUB1P53999 127 aaKnown RBP eCLIP9.6□□□□□ -0.87
RBM39-206ENST00000403542 PRNTQ86SH4 94 aa9.6□□□□□ -0.87
RBM39-206ENST00000403542 PNKDQ8N490 385 aa9.6□□□□□ -0.87
RBM39-206ENST00000403542 TMEM167AQ8TBQ9 72 aa9.6□□□□□ -0.87
RBM39-206ENST00000403542 URB1-AS1Q96HZ7 61 aa9.6□□□□□ -0.87
RBM39-206ENST00000403542 SELENOKQ9Y6D0 94 aa9.6□□□□□ -0.87
RBM39-206ENST00000403542 A0A0G2JNJ9 132 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 FSTL3O95633 263 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 P01737 135 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 LRRC10Q5BKY1 277 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 PRSS33Q8NF86 280 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 C17orf77Q96MU5 243 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 DYNLRB1Q9NP97 96 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 Q9UFV3 132 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 SNAI2O43623 268 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 VMA21Q3ZAQ7 101 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 TEX36Q5VZQ5 186 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 GOLT1AQ6ZVE7 132 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 DAZAP1Q96EP5 407 aaKnown RBP9.59□□□□□ -0.87
RBM39-206ENST00000403542 Q9H3A6 140 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 FBXL15Q9H469 300 aa9.59□□□□□ -0.87
RBM39-206ENST00000403542 C16orf97H3BN30 126 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 TMEM178BH3BS89 294 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 BTF3P20290 206 aaKnown RBP9.58□□□□□ -0.88
RBM39-206ENST00000403542 RALYQ9UKM9 306 aaKnown RBP9.58□□□□□ -0.88
RBM39-206ENST00000403542 ZFP30Q9Y2G7 519 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 IGLC7A0M8Q6 106 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 LOXP28300 417 aaPredicted RBP9.58□□□□□ -0.88
RBM39-206ENST00000403542 CA7P43166 264 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 PTTG1IPP53801 180 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 PLGLAQ15195 96 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 VSTM2AQ8TAG5 236 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 PERPQ96FX8 193 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 GPR82Q96P67 336 aa9.58□□□□□ -0.88
RBM39-206ENST00000403542 COL8A1P27658 744 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 HBBP68871 147 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 KLF17Q5JT82 389 aaPredicted RBP9.57□□□□□ -0.88
RBM39-206ENST00000403542 RPP21Q9H633 154 aaKnown RBP9.57□□□□□ -0.88
RBM39-206ENST00000403542 LINC00574Q9H8X3 128 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 HRNRQ86YZ3 2850 aaPredicted RBP9.57□□□□□ -0.88
RBM39-206ENST00000403542 TMSB15BA0A087X1C1 80 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 C2orf70A6NJV1 201 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 CCL25O15444 150 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 LY6HO94772 140 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 RPL27AP46776 148 aaKnown RBP9.57□□□□□ -0.88
RBM39-206ENST00000403542 PIP4P1Q86T03 277 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 KLHDC1Q8N7A1 406 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 OR4C46A6NHA9 309 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 CHEK1O14757 476 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 THBDP07204 575 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 PSG1P11464 419 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 FXYD7P58549 80 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 MRGPRG-AS1Q2M3A8 158 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 COX19Q49B96 90 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 NCOR1P1Q9H4R4 102 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 C7orf69Q9H7B7 122 aa9.57□□□□□ -0.88
RBM39-206ENST00000403542 C20orf202A1L168 122 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 TCRAP04437 139 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 PRR30Q53SZ7 412 aaPredicted RBP9.56□□□□□ -0.88
RBM39-206ENST00000403542 TMEM186Q96B77 213 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 ZC2HC1AQ96GY0 325 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 INSIG2Q9Y5U4 225 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 IGHV3OR16-8A0A075B7F1 116 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 IGHV1-24A0A0C4DH33 117 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 IGHV1-8P0DP01 117 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 ZNF596Q8TC21 504 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 MRPL27Q9P0M9 148 aaKnown RBP9.56□□□□□ -0.88
RBM39-206ENST00000403542 VPS13CQ709C8 3753 aa9.56□□□□□ -0.88
RBM39-206ENST00000403542 MEF2CQ06413 473 aaPredicted RBP9.55□□□□□ -0.88
RBM39-206ENST00000403542 MPV17L2Q567V2 206 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 Q6ZS92 163 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 BCL6BQ8N143 479 aaPredicted RBP9.55□□□□□ -0.88
RBM39-206ENST00000403542 OR8B3Q8NGG8 313 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 C22orf15Q8WYQ4 148 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 TMEM70Q9BUB7 260 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 PTPRQQ9UMZ3 2332 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 A8MWL6 223 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 M0R3E3 92 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 CNIH1O95406 144 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 GP9P14770 177 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 MYCNOSP40205 109 aa9.55□□□□□ -0.88
RBM39-206ENST00000403542 LEPROTL1O95214 131 aa9.54□□□□□ -0.88
RBM39-206ENST00000403542 CEACAM8P31997 349 aaPredicted RBP9.54□□□□□ -0.88
RBM39-206ENST00000403542 THAP8Q8NA92 274 aa9.54□□□□□ -0.88
RBM39-206ENST00000403542 FAM57AQ8TBR7 257 aa9.54□□□□□ -0.88
RBM39-206ENST00000403542 SRSF12Q8WXF0 261 aaKnown RBP9.54□□□□□ -0.88
RBM39-206ENST00000403542 CHD8Q9HCK8 2581 aa9.54□□□□□ -0.88
RBM39-206ENST00000403542 A0A1B0GXF2 115 aa9.54□□□□□ -0.88
RBM39-206ENST00000403542 GAGE1Q13065 139 aa9.54□□□□□ -0.88
RBM39-206ENST00000403542 WIPF2Q8TF74 440 aaPredicted RBP9.54□□□□□ -0.88
RBM39-206ENST00000403542 RNASE6Q93091 150 aaKnown RBP9.54□□□□□ -0.88
RBM39-206ENST00000403542 RNF24Q9Y225 148 aa9.54□□□□□ -0.88
RBM39-206ENST00000403542 HILPDAQ9Y5L2 63 aa9.54□□□□□ -0.88
RBM39-206ENST00000403542 IGHV3-35A0A0C4DH35 117 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 LOC389332A0A1B0GUA5 103 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 PRRG2O14669 202 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
RBM39-206ENST00000403542 HTR1DP28221 377 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms