RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MALRD1Q5VYJ5 2156 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TNCP24821 2201 aa12.69□□□□□ -0.38
CHRFAM7A-203ENST00000401522 CRYGCP07315 174 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 C8orf46Q8TAG6 207 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 WIPF2Q8TF74 440 aaPredicted RBP12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TNFRSF14Q92956 283 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 C20orf144Q9BQM9 153 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 CHRDL1Q9BU40 450 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TMEM133Q9H2Q1 129 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 F2Z2F3 143 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SPINK4O60575 86 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 MRGPRG-AS1Q2M3A8 158 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 LY6G5BQ8NDX9 201 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 C22orf15Q8WYQ4 148 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 GRAMD2BQ96HH9 432 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TRGV9Q99603 122 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
CHRFAM7A-203ENST00000401522 LOC105371242A0A075B767 164 aa12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 IGLC7A0M8Q6 106 aa12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 MRPL54Q6P161 138 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 LINC00305Q7Z4B0 112 aa12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 MRPL52Q86TS9 123 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 KCNS1Q96KK3 526 aa12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 ZNF331Q9NQX6 463 aaPredicted RBP12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TPSG1Q9NRR2 321 aa12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TNFRSF19Q9NS68 423 aa12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 MRPL36Q9P0J6 103 aaKnown RBP12.67□□□□□ -0.38
CHRFAM7A-203ENST00000401522 C22orf46C9J442 243 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 M0R143 59 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 BMPR1BO00238 502 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 EREGO14944 169 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 ENSAO43768 121 aaKnown RBP12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 APCSP02743 223 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 GPX1P07203 203 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 MYCNOSP40205 109 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SLC35B1P78383 322 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 PAX2Q02962 417 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 TMEM183BQ1AE95 376 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SMIM12Q96EX1 92 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 LINC00479Q96M42 142 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 IGHV3-48P01763 117 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 REG1AP05451 166 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 RPL27AP46776 148 aaKnown RBP12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 NHLRC2Q8NBF2 726 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 RITA1Q96K30 269 aa12.66□□□□□ -0.38
CHRFAM7A-203ENST00000401522 PPIAL4CA0A0B4J2A2 164 aa12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 B4DSR2 109 aa12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 CORTO00230 105 aa12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 CRYGBP07316 175 aa12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 PPIAL4GP0DN37 164 aa12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 PRRX1P54821 245 aa12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 C11orf42Q8N5U0 333 aa12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 SETXQ7Z333 2677 aaKnown RBP12.65□□□□□ -0.38
CHRFAM7A-203ENST00000401522 ZNF253O75346 499 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 LIPFP07098 398 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CD33P20138 364 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 SRIP30626 198 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 KIAA1644Q3SXP7 199 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TMEM116Q8NCL8 245 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MAPK1IP1LQ8NDC0 245 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 VAMP8Q9BV40 100 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ITPR3Q14573 2671 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TRAV34A0A0B4J273 112 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CA1P00915 261 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MSMBP08118 114 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 HIST1H1EP10412 219 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ORM2P19652 201 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 RAB4AP20338 218 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 NUTF2P61970 127 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 HCP5Q6MZN7 132 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 OR1B1Q8NGR6 318 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 NUDT11Q96G61 164 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 FBXL7Q9UJT9 491 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TBL2Q9Y4P3 447 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 KLF12Q9Y4X4 402 aa12.64□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MED13LQ71F56 2210 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 IGHV2-26A0A0B4J1V2 119 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 IGHV2-70DA0A0C4DH43 119 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 A0A1W2PS18 150 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 HYPMO75409 117 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MOSP00540 346 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 AMTP48728 403 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 COMPP49747 757 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MFAP2P55001 183 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 UBE2G1P62253 170 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 TNXAQ16473 311 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CIARTQ8N365 385 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 LINC01356Q8N9X3 169 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 VN1R17PQ8TDU5 208 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 AKAP9Q99996 3911 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 MYO9AB2RTY4 2548 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 CR1P17927 2039 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
CHRFAM7A-203ENST00000401522 M0QZK8 103 aa12.62□□□□□ -0.39
CHRFAM7A-203ENST00000401522 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms