RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 C1orf194Q5T5A4 169 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 PSG8Q9UQ74 426 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 TMEM249Q2WGJ8 235 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 SLC25A34Q6PIV7 304 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 NUP35Q8NFH5 326 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 TPSG1Q9NRR2 321 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 DLX6P56179 175 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 OR4C46A6NHA9 309 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 CNTFRP26992 372 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 BRWD1-AS2P59051 145 aa14.98□□□□□ -0.01
USP48-204ENST00000400301 RPS20P60866 119 aaKnown RBP14.98□□□□□ -0.01
USP48-204ENST00000400301 A0A1B0GWJ7 208 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 ZNF207O43670 478 aaKnown RBP14.97□□□□□ -0.01
USP48-204ENST00000400301 CEACAM4O75871 244 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 PF4V1P10720 104 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 ZNF329Q86UD4 541 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 CIARTQ8N365 385 aaPredicted RBP14.97□□□□□ -0.01
USP48-204ENST00000400301 F5H697 171 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 APOHP02749 345 aaPredicted RBP14.97□□□□□ -0.01
USP48-204ENST00000400301 TPTE2P1Q5T6R2 138 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 C11orf52Q96A22 123 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 VPS25Q9BRG1 176 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 PYGO2Q9BRQ0 406 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 PROP1O75360 226 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 THBDP07204 575 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 ST6GALNAC6Q969X2 333 aa14.97□□□□□ -0.01
USP48-204ENST00000400301 CUL9Q8IWT3 2517 aa14.96□□□□□ -0.01
USP48-204ENST00000400301 SIAH2O43255 324 aa14.96□□□□□ -0.01
USP48-204ENST00000400301 P0C879 139 aa14.96□□□□□ -0.01
USP48-204ENST00000400301 ZNF738Q8NE65 137 aa14.96□□□□□ -0.01
USP48-204ENST00000400301 M0QZ24 198 aa14.96□□□□□ -0.01
USP48-204ENST00000400301 DDB2Q92466 427 aa14.96□□□□□ -0.01
USP48-204ENST00000400301 ZFP30Q9Y2G7 519 aa14.96□□□□□ -0.01
USP48-204ENST00000400301 ARFGEF3Q5TH69 2177 aa14.96□□□□□ -0.02
USP48-204ENST00000400301 RAB9AP51151 201 aa14.96□□□□□ -0.02
USP48-204ENST00000400301 YPEL3P61236 119 aaPredicted RBP14.95□□□□□ -0.02
USP48-204ENST00000400301 LY6EQ16553 131 aa14.95□□□□□ -0.02
USP48-204ENST00000400301 CLEC2AQ6UVW9 174 aa14.95□□□□□ -0.02
USP48-204ENST00000400301 CBY1Q9Y3M2 126 aa14.95□□□□□ -0.02
USP48-204ENST00000400301 V9GYV3 84 aa14.95□□□□□ -0.02
USP48-204ENST00000400301 TLN1Q9Y490 2541 aaKnown RBP14.95□□□□□ -0.02
USP48-204ENST00000400301 COL5A1P20908 1838 aaPredicted RBP14.95□□□□□ -0.02
USP48-204ENST00000400301 NMUP48645 174 aa14.95□□□□□ -0.02
USP48-204ENST00000400301 ATP5L2Q7Z4Y8 100 aa14.95□□□□□ -0.02
USP48-204ENST00000400301 NIT1Q86X76 327 aa14.95□□□□□ -0.02
USP48-204ENST00000400301 WFDC3Q8IUB2 231 aa14.95□□□□□ -0.02
USP48-204ENST00000400301 GPX1P07203 203 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 EEF1AKMT3Q96AZ1 226 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 A0A0C4DFX4 3053 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 ATP5G2Q06055 141 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 LINC00311Q8N616 119 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 BEND2Q8NDZ0 799 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 PRELID3AQ96N28 172 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 RNF5Q99942 180 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 SLC25A2Q9BXI2 301 aa14.94□□□□□ -0.02
USP48-204ENST00000400301 A8MWP6 167 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 FNDC4Q9H6D8 234 aaPredicted RBP14.93□□□□□ -0.02
USP48-204ENST00000400301 CHD3Q12873 2000 aaKnown RBP14.93□□□□□ -0.02
USP48-204ENST00000400301 GUSBP1Q15486 140 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 MAP1LC3AQ9H492 121 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 NOTCH3Q9UM47 2321 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 K7EN84 100 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 CLEC19AQ6UXS0 136 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 PRRC2CQ9Y520 2896 aaKnown RBP14.93□□□□□ -0.02
USP48-204ENST00000400301 MGPP08493 103 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 TMEM97Q5BJF2 176 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 Q6AWC8 147 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 LCN12Q6JVE5 192 aa14.93□□□□□ -0.02
USP48-204ENST00000400301 PTPRQQ9UMZ3 2332 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 LINC00614P0C842 121 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 C12orf54Q6X4T0 127 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 C5orf64Q2M2E5 130 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 CTSZQ9UBR2 303 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 C3orf79P0CE67 100 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 Q0VG73 95 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 ASPHD1Q5U4P2 390 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 RASL11AQ6T310 242 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 MYOZ3Q8TDC0 251 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 PMCHL2Q9BQD1 86 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 EXPH5Q8NEV8 1989 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 UNC80Q8N2C7 3258 aa14.92□□□□□ -0.02
USP48-204ENST00000400301 LAMTOR2Q9Y2Q5 125 aa14.91□□□□□ -0.02
USP48-204ENST00000400301 TRBV20OR9-2A0A075B6H5 130 aa14.91□□□□□ -0.02
USP48-204ENST00000400301 SSBP2P81877 361 aaPredicted RBP14.91□□□□□ -0.02
USP48-204ENST00000400301 OR10J6PQ8NGY7 276 aa14.91□□□□□ -0.02
USP48-204ENST00000400301 POLR3KQ9Y2Y1 108 aaPredicted RBP14.91□□□□□ -0.02
USP48-204ENST00000400301 K7ENP7 123 aa14.91□□□□□ -0.02
USP48-204ENST00000400301 M0R3E3 92 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 PDLIM4P50479 330 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 VMO1Q7Z5L0 202 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 TRGV3P03979 118 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 RHOGP84095 191 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 FER1L6-AS1Q8NA97 138 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 TRAV9-2A0A087WT02 112 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 A0A1B0GW15 77 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 ATP5J2P56134 94 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 UTF1Q5T230 341 aa14.9□□□□□ -0.02
USP48-204ENST00000400301 RPL15P61313 204 aaKnown RBP14.89□□□□□ -0.03
USP48-204ENST00000400301 TOMM40O96008 361 aa14.89□□□□□ -0.03
USP48-204ENST00000400301 UQCRFS1P47985 274 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms