RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 RNASE7Q9H1E1 156 aaKnown RBP12.42□□□□□ -0.42
CDC42-203ENST00000400259 KLF12Q9Y4X4 402 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 LYZP61626 148 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 RANP62826 216 aaKnown RBP12.42□□□□□ -0.42
CDC42-203ENST00000400259 GAGE1Q13065 139 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 IBA57Q5T440 356 aaKnown RBP12.42□□□□□ -0.42
CDC42-203ENST00000400259 FAM231DQ6ZW35 169 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 TMEM190Q8WZ59 177 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 SMIM12Q96EX1 92 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 AJUBAQ96IF1 538 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 LINC00479Q96M42 142 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 SLC25A39Q9BZJ4 359 aaPredicted RBP12.42□□□□□ -0.42
CDC42-203ENST00000400259 ABCA1O95477 2261 aa12.42□□□□□ -0.42
CDC42-203ENST00000400259 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
CDC42-203ENST00000400259 POLR3KQ9Y2Y1 108 aaPredicted RBP12.41□□□□□ -0.42
CDC42-203ENST00000400259 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
CDC42-203ENST00000400259 TOMM40O96008 361 aa12.41□□□□□ -0.42
CDC42-203ENST00000400259 SNRPCP09234 159 aaKnown RBP12.41□□□□□ -0.42
CDC42-203ENST00000400259 TMEM11P17152 192 aa12.41□□□□□ -0.42
CDC42-203ENST00000400259 NDPQ00604 133 aa12.41□□□□□ -0.42
CDC42-203ENST00000400259 C5orf17Q8NAS9 161 aa12.41□□□□□ -0.42
CDC42-203ENST00000400259 BLNKQ8WV28 456 aa12.41□□□□□ -0.42
CDC42-203ENST00000400259 TRAV30A0A087WSZ9 112 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 SMIM27A0A1W2PRY6 76 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 PGPA6NDG6 321 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 SLC25A5P05141 298 aaKnown RBP12.4□□□□□ -0.42
CDC42-203ENST00000400259 MGST1P10620 155 aaKnown RBP12.4□□□□□ -0.42
CDC42-203ENST00000400259 G0S2P27469 103 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 BAGE2Q86Y30 109 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 PRO1933Q9H354 126 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 GOLT1BQ9Y3E0 138 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 NCBP2LA6PVI3 153 aaKnown RBP12.4□□□□□ -0.42
CDC42-203ENST00000400259 A8MWP6 167 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 NUPR1O60356 82 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 RPL19P84098 196 aaKnown RBP12.4□□□□□ -0.42
CDC42-203ENST00000400259 OR8I2Q8N0Y5 310 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 ATG101Q9BSB4 218 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 SHANK2-AS3Q9BTD1 123 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 LPAR2Q9HBW0 351 aa12.4□□□□□ -0.42
CDC42-203ENST00000400259 H3BRN7 92 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 IGHV4-39P01824 125 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 FAM106CPP0CH98 169 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 HIST1H1EP10412 219 aaKnown RBP12.39□□□□□ -0.43
CDC42-203ENST00000400259 GNG5P63218 68 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 LEMD1Q68G75 181 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 TMEM256Q8N2U0 113 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 Q9H3A6 140 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 C7orf69Q9H7B7 122 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 C1RLQ9NZP8 487 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 TRAV34A0A0B4J273 112 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 WI2-2373I1.2A0A1W2PRP0 233 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 GZMBP10144 247 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 ADMP35318 185 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 COX19Q49B96 90 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 ZNF491Q8N8L2 437 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 Q8N9W7 124 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 MBD6Q96DN6 1003 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 GNB1LQ9BYB4 327 aa12.39□□□□□ -0.43
CDC42-203ENST00000400259 HLA-DRB1P01911 266 aa12.38□□□□□ -0.43
CDC42-203ENST00000400259 CBLN1P23435 193 aa12.38□□□□□ -0.43
CDC42-203ENST00000400259 MFAP4P55083 255 aa12.38□□□□□ -0.43
CDC42-203ENST00000400259 KLF17Q5JT82 389 aaPredicted RBP12.38□□□□□ -0.43
CDC42-203ENST00000400259 OTORQ9NRC9 128 aa12.38□□□□□ -0.43
CDC42-203ENST00000400259 IGHV7-81A0A0B4J1V7 117 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 DLEU1O43261 78 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 EGR2P11161 476 aaPredicted RBP12.37□□□□□ -0.43
CDC42-203ENST00000400259 SAA4P35542 130 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 UBE2G1P62253 170 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 NHLRC2Q8NBF2 726 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 RNF125Q96EQ8 232 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 FMC1Q96HJ9 113 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 ZNF586Q9NXT0 402 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 RNF24Q9Y225 148 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 F8W735 103 aaPredicted RBP12.37□□□□□ -0.43
CDC42-203ENST00000400259 MT-ND6P03923 174 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 TCRAP04437 139 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 BRS3P32247 399 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 JOSD1Q15040 202 aaPredicted RBP12.37□□□□□ -0.43
CDC42-203ENST00000400259 KLK9Q2XQG4 91 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 WDR73Q6P4I2 378 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 GPR82Q96P67 336 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 CHRDL1Q9BU40 450 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 MLST8Q9BVC4 326 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 MRPL18Q9H0U6 180 aaKnown RBP12.37□□□□□ -0.43
CDC42-203ENST00000400259 THYN1Q9P016 225 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 KLK9Q9UKQ9 250 aa12.37□□□□□ -0.43
CDC42-203ENST00000400259 GRIFINA4D1Z8 144 aa12.36□□□□□ -0.43
CDC42-203ENST00000400259 ZNF705GA8MUZ8 300 aaPredicted RBP12.36□□□□□ -0.43
CDC42-203ENST00000400259 GNG7O60262 68 aa12.36□□□□□ -0.43
CDC42-203ENST00000400259 ZNF25P17030 456 aaPredicted RBP12.36□□□□□ -0.43
CDC42-203ENST00000400259 BPIFA4PQ86YQ2 179 aa12.36□□□□□ -0.43
CDC42-203ENST00000400259 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
CDC42-203ENST00000400259 IZUMO1RA6ND01 250 aa12.35□□□□□ -0.43
CDC42-203ENST00000400259 NPFFO15130 113 aa12.35□□□□□ -0.43
CDC42-203ENST00000400259 SPINK4O60575 86 aa12.35□□□□□ -0.43
CDC42-203ENST00000400259 LTAP01374 205 aa12.35□□□□□ -0.43
CDC42-203ENST00000400259 FCGR2BP31994 310 aaPredicted RBP12.35□□□□□ -0.43
CDC42-203ENST00000400259 IER3P46695 156 aa12.35□□□□□ -0.43
CDC42-203ENST00000400259 FAM120AOSQ5T036 256 aa12.35□□□□□ -0.43
CDC42-203ENST00000400259 S100A7AQ86SG5 101 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms