RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 UBE2NLQ5JXB2 153 aa12.39□□□□□ -0.43
UFD1-202ENST00000399523 GPR141Q7Z602 305 aa12.39□□□□□ -0.43
UFD1-202ENST00000399523 FCGR1BQ92637 280 aa12.39□□□□□ -0.43
UFD1-202ENST00000399523 TIMM8BQ9Y5J9 83 aaPredicted RBP12.39□□□□□ -0.43
UFD1-202ENST00000399523 H3BNG1 76 aa12.38□□□□□ -0.43
UFD1-202ENST00000399523 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
UFD1-202ENST00000399523 RCVRNP35243 200 aa12.38□□□□□ -0.43
UFD1-202ENST00000399523 TRIM16LQ309B1 348 aa12.38□□□□□ -0.43
UFD1-202ENST00000399523 FAM219AQ8IW50 185 aa12.38□□□□□ -0.43
UFD1-202ENST00000399523 BAP18Q8IXM2 172 aa12.38□□□□□ -0.43
UFD1-202ENST00000399523 SPARTQ8N0X7 666 aa12.38□□□□□ -0.43
UFD1-202ENST00000399523 OR8I2Q8N0Y5 310 aa12.38□□□□□ -0.43
UFD1-202ENST00000399523 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
UFD1-202ENST00000399523 ZNF701M0R085 212 aaPredicted RBP12.37□□□□□ -0.43
UFD1-202ENST00000399523 UCP1P25874 307 aa12.37□□□□□ -0.43
UFD1-202ENST00000399523 TAS2R60P59551 318 aa12.37□□□□□ -0.43
UFD1-202ENST00000399523 GABARAPL2P60520 117 aa12.37□□□□□ -0.43
UFD1-202ENST00000399523 SP6Q3SY56 376 aa12.37□□□□□ -0.43
UFD1-202ENST00000399523 RNASE12Q5GAN4 147 aaKnown RBP12.37□□□□□ -0.43
UFD1-202ENST00000399523 NOXA1Q86UR1 476 aa12.37□□□□□ -0.43
UFD1-202ENST00000399523 TMEM256Q8N2U0 113 aa12.37□□□□□ -0.43
UFD1-202ENST00000399523 OR10J6PQ8NGY7 276 aa12.37□□□□□ -0.43
UFD1-202ENST00000399523 C16orf74Q96GX8 76 aa12.37□□□□□ -0.43
UFD1-202ENST00000399523 A0A0J9YY99 117 aa12.36□□□□□ -0.43
UFD1-202ENST00000399523 ZNF90Q03938 601 aa12.36□□□□□ -0.43
UFD1-202ENST00000399523 KLF9Q13886 244 aaPredicted RBP12.36□□□□□ -0.43
UFD1-202ENST00000399523 NMSQ5H8A3 153 aa12.36□□□□□ -0.43
UFD1-202ENST00000399523 LINC00612Q8N6U2 182 aa12.36□□□□□ -0.43
UFD1-202ENST00000399523 SAMD12Q8N8I0 201 aa12.36□□□□□ -0.43
UFD1-202ENST00000399523 RNASE11Q8TAA1 199 aaKnown RBP12.36□□□□□ -0.43
UFD1-202ENST00000399523 CNBD2Q96M20 576 aa12.36□□□□□ -0.43
UFD1-202ENST00000399523 LINC01587Q99440 93 aa12.36□□□□□ -0.43
UFD1-202ENST00000399523 NOP10Q9NPE3 64 aaKnown RBP12.36□□□□□ -0.43
UFD1-202ENST00000399523 IGKV1D-37A0A075B6S9 117 aa12.35□□□□□ -0.43
UFD1-202ENST00000399523 TRAV12-2A0A075B6T6 113 aa12.35□□□□□ -0.43
UFD1-202ENST00000399523 LOC100506127A0A0U1RQW1 187 aa12.35□□□□□ -0.43
UFD1-202ENST00000399523 CEBPZOSA8MTT3 80 aa12.35□□□□□ -0.43
UFD1-202ENST00000399523 KRTAP29-1A8MX34 341 aaPredicted RBP12.35□□□□□ -0.43
UFD1-202ENST00000399523 ZNF493Q6ZR52 646 aa12.35□□□□□ -0.43
UFD1-202ENST00000399523 LHFPL1Q86WI0 220 aa12.35□□□□□ -0.43
UFD1-202ENST00000399523 ZFP92A6NM28 416 aa12.34□□□□□ -0.43
UFD1-202ENST00000399523 HOXA5P20719 270 aa12.34□□□□□ -0.43
UFD1-202ENST00000399523 LYZP61626 148 aa12.34□□□□□ -0.43
UFD1-202ENST00000399523 SERTAD4-AS1Q5TG53 156 aa12.34□□□□□ -0.43
UFD1-202ENST00000399523 TMEM144Q7Z5S9 345 aa12.34□□□□□ -0.43
UFD1-202ENST00000399523 CROCCP3Q8IVE0 287 aa12.34□□□□□ -0.43
UFD1-202ENST00000399523 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
UFD1-202ENST00000399523 A0A087WTM6 91 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 SNRPGP15A8MWD9 76 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 BOLA2-SMG1P6H3BVE0 249 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 CDS2O95674 445 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 GALR1P47211 349 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 PPP1R14BQ96C90 147 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 RSG1Q9BU20 258 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 COPZ2Q9P299 210 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 CACNG5Q9UF02 275 aa12.33□□□□□ -0.44
UFD1-202ENST00000399523 SIVA1O15304 175 aa12.32□□□□□ -0.44
UFD1-202ENST00000399523 DNAH10OSP0CZ25 163 aa12.32□□□□□ -0.44
UFD1-202ENST00000399523 HTN1P15515 57 aa12.32□□□□□ -0.44
UFD1-202ENST00000399523 GCSHP23434 173 aa12.32□□□□□ -0.44
UFD1-202ENST00000399523 GAMTQ14353 236 aa12.32□□□□□ -0.44
UFD1-202ENST00000399523 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
UFD1-202ENST00000399523 TMEM263Q8WUH6 116 aaKnown RBP12.32□□□□□ -0.44
UFD1-202ENST00000399523 SLC25A39Q9BZJ4 359 aaPredicted RBP12.32□□□□□ -0.44
UFD1-202ENST00000399523 SLC25A32Q9H2D1 315 aa12.32□□□□□ -0.44
UFD1-202ENST00000399523 ADAP1O75689 374 aa12.31□□□□□ -0.44
UFD1-202ENST00000399523 FABP1P07148 127 aa12.31□□□□□ -0.44
UFD1-202ENST00000399523 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.31□□□□□ -0.44
UFD1-202ENST00000399523 CCDC71LQ8N9Z2 235 aa12.31□□□□□ -0.44
UFD1-202ENST00000399523 TMEM222Q9H0R3 208 aa12.31□□□□□ -0.44
UFD1-202ENST00000399523 TNFRSF18Q9Y5U5 241 aa12.31□□□□□ -0.44
UFD1-202ENST00000399523 U3KQ87 197 aa12.31□□□□□ -0.44
UFD1-202ENST00000399523 TRAV8-2A0A0B4J237 113 aa12.3□□□□□ -0.44
UFD1-202ENST00000399523 ZNF182P17025 639 aaPredicted RBP12.3□□□□□ -0.44
UFD1-202ENST00000399523 HAMPP81172 84 aa12.3□□□□□ -0.44
UFD1-202ENST00000399523 NFE4Q86UQ8 179 aa12.3□□□□□ -0.44
UFD1-202ENST00000399523 LHFPL5Q8TAF8 219 aa12.3□□□□□ -0.44
UFD1-202ENST00000399523 ZFAND1Q8TCF1 268 aa12.3□□□□□ -0.44
UFD1-202ENST00000399523 GLYATL2Q8WU03 294 aa12.3□□□□□ -0.44
UFD1-202ENST00000399523 RBPMSQ93062 196 aaKnown RBP12.3□□□□□ -0.44
UFD1-202ENST00000399523 CACFD1Q9UGQ2 172 aa12.3□□□□□ -0.44
UFD1-202ENST00000399523 A0A096LPF7 62 aa12.29□□□□□ -0.44
UFD1-202ENST00000399523 GPX4P36969 197 aaPredicted RBP12.29□□□□□ -0.44
UFD1-202ENST00000399523 OR2F1Q13607 317 aa12.29□□□□□ -0.44
UFD1-202ENST00000399523 IGFL4Q6B9Z1 124 aa12.29□□□□□ -0.44
UFD1-202ENST00000399523 SYT8Q8NBV8 401 aa12.29□□□□□ -0.44
UFD1-202ENST00000399523 OR4D5Q8NGN0 318 aa12.29□□□□□ -0.44
UFD1-202ENST00000399523 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
UFD1-202ENST00000399523 ZNF98A6NK75 572 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 OR5AC1P0C628 307 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 SNX29P2Q8IUI4 249 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 SELENOHQ8IZQ5 122 aaKnown RBP12.28□□□□□ -0.44
UFD1-202ENST00000399523 RNF182Q8N6D2 247 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 OR1B1Q8NGR6 318 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 OR13C8Q8NGS7 320 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 VSIG2Q96IQ7 327 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 TRGV9Q99603 122 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 SLC25A22Q9H936 323 aa12.28□□□□□ -0.44
UFD1-202ENST00000399523 SLC45A2Q9UMX9 530 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms