RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NPCDR1Q9BY65 106 aa9.33□□□□□ -0.92
HLA-DQB1-203ENST00000399082 DOK5Q9P104 306 aa9.33□□□□□ -0.92
HLA-DQB1-203ENST00000399082 RFNGQ9Y644 331 aa9.33□□□□□ -0.92
HLA-DQB1-203ENST00000399082 SORL1Q92673 2214 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 BUB3O43684 328 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 DFFBO76075 338 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 CFDP00746 253 aaPredicted RBP9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 CXCL2P19875 107 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 RPL29P47914 159 aaKnown RBP9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 EIF2B2P49770 351 aaKnown RBP9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 C16orf54Q6UWD8 224 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 OR2K2Q8NGT1 345 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 PRR25Q96S07 402 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 RSG1Q9BU20 258 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 PARD6GQ9BYG4 376 aaPredicted RBP9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 RABAC1Q9UI14 185 aa9.32□□□□□ -0.92
HLA-DQB1-203ENST00000399082 HMSDA8MTL9 139 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 H3BRN7 92 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 J3QL48 77 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 MPDU1O75352 247 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 ORM2P19652 201 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 AP2S1P53680 142 aaPredicted RBP9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 AKAP14Q86UN6 197 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 INO80EQ8NBZ0 244 aaPredicted RBP9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 TMEM37Q8WXS4 190 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 UHRF2Q96PU4 802 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 NEURL2Q9BR09 285 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 MFFQ9GZY8 342 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 ARL6Q9H0F7 186 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 AURKAIP1Q9NWT8 199 aaPredicted RBP9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 ZNF256Q9Y2P7 627 aaPredicted RBP9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 PXMP4Q9Y6I8 212 aa9.31□□□□□ -0.92
HLA-DQB1-203ENST00000399082 TRAV25A0A0B4J276 109 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 TSPAN4O14817 238 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 GP9P14770 177 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 NUP62P37198 522 aaPredicted RBP9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 B2MP61769 119 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 GCSAMLQ5JQS6 135 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 LEMD1Q68G75 181 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 RPL7L1Q6DKI1 246 aaKnown RBP9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 LCN12Q6JVE5 192 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 TCF24Q7RTU0 167 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 KCNRGQ8N5I3 272 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 C17orf77Q96MU5 243 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 SCRT1Q9BWW7 348 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 CYTL1Q9NRR1 136 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 SLC39A9Q9NUM3 307 aa9.3□□□□□ -0.92
HLA-DQB1-203ENST00000399082 ZNF98A6NK75 572 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 K7EIL1 84 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 HYPMO75409 117 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 C1QBP02746 253 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 RAB31Q13636 194 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 ZNF345Q14585 488 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 Q8N1Y9 231 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 SHANK2-AS3Q9BTD1 123 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 SLC25A39Q9BZJ4 359 aaPredicted RBP9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 ARV1Q9H2C2 271 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 SLC25A32Q9H2D1 315 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 HIGD1AQ9Y241 93 aa9.29□□□□□ -0.92
HLA-DQB1-203ENST00000399082 IGKV3-7A0A075B6H7 116 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 A0A1W2PS18 150 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 IFNA5P01569 189 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 CD7P09564 240 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 OR5G3P0C626 314 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 C1orf194Q5T5A4 169 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 PXDC1Q5TGL8 231 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 FAM24BQ8N5W8 94 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 SPAG8Q99932 426 aaPredicted RBP9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 C19orf73Q9NVV2 129 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 SMAD5-AS1Q9Y6J3 95 aa9.28□□□□□ -0.92
HLA-DQB1-203ENST00000399082 COX7A2P2O60397 106 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 BMI1P35226 326 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 DEFA6Q01524 100 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ZNF266Q14584 549 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 GUCA2BQ16661 112 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 LGALSLQ3ZCW2 172 aaPredicted RBP9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 RBPMS2Q6ZRY4 209 aaKnown RBP9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 GBGT1Q8N5D6 347 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 HSD17B11Q8NBQ5 300 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 NARS2Q96I59 477 aaKnown RBP9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 WFDC10AQ9H1F0 79 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SH3BGRL3Q9H299 93 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 MS4A6AQ9H2W1 248 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 TMEM231Q9H6L2 316 aa9.27□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 TRAV5A0A0B4J249 113 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 K7EQG2 157 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 TFPI2P48307 235 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 ODF3L2Q3SX64 289 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 C10orf113Q5VZT2 155 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SPATA31B1PQ5VZV4 182 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 LAMTOR1Q6IAA8 161 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SIGLEC15Q6ZMC9 328 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 LINC00305Q7Z4B0 112 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 SCGB1C1Q8TD33 95 aa9.26□□□□□ -0.93
HLA-DQB1-203ENST00000399082 DCANP1Q8TF63 244 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms