RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 RPP21Q9H633 154 aaKnown RBP9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 IL36BQ9NZH7 164 aa9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 PEMTQ9UBM1 199 aa9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 UQCR10Q9UDW1 63 aa9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 B4DSR2 109 aa9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 SAP30O75446 220 aa9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 CDX1P47902 265 aaPredicted RBP9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 RPL23P62829 140 aaKnown RBP9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 HGFACQ04756 655 aa9.48□□□□□ -0.89
PCDHGA8-201ENST00000398604 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 H7C1H1 209 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 M0QZK8 103 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 PSG1P11464 419 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 CIARTQ8N365 385 aaPredicted RBP9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 C18orf12Q96KH6 178 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 JMJD8Q96S16 334 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 TBL2Q9Y4P3 447 aaKnown RBP9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 PLXNB1O43157 2135 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 GZMBP10144 247 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 B3GALT5-AS1P59052 145 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 SUPT4H1P63272 117 aaKnown RBP9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 OCC1Q8TAD7 63 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 PSG8Q9UQ74 426 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 APOMO95445 188 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 FABP2P12104 132 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 EPDR1Q9UM22 224 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 SPTBN4Q9H254 2564 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 IGHV1-3A0A0C4DH29 117 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 TMEM183AQ8IXX5 376 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 LRTM2Q8N967 370 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 TMEM101Q96IK0 257 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 CLDN16Q9Y5I7 305 aa9.47□□□□□ -0.89
PCDHGA8-201ENST00000398604 MBD3L4A6NDZ8 208 aaPredicted RBP9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 MBD3L3A6NE82 208 aaPredicted RBP9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 MBD3L5A6NJ08 208 aaPredicted RBP9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 SPATA31B1PQ5VZV4 182 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 MBD3L2Q8NHZ7 208 aaPredicted RBP9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 CYTL1Q9NRR1 136 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 ALPK3Q96L96 1907 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 TRGV4A0A0C4DH28 118 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 LINC00473A8K010 186 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 E7EQL1 145 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 TCF15Q12870 199 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 TREML4Q6UXN2 200 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 OR5AN1Q8NGI8 311 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 SCRT1Q9BWW7 348 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 WFDC1Q9HC57 220 aa9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 PNRC2Q9NPJ4 139 aaKnown RBP9.46□□□□□ -0.89
PCDHGA8-201ENST00000398604 IGKV1D-17A0A075B6S4 117 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 NDUFA3O95167 84 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 EVI2AP22794 236 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 FXYD7P58549 80 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 COQ2Q96H96 371 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 XIRP2A4UGR9 3374 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 IGHV3-73A0A0B4J1V6 119 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 CTAG1AP78358 180 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 ERASQ7Z444 233 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 ORMDL3Q8N138 153 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 PKD1L2Q7Z442 2459 aa9.46□□□□□ -0.9
PCDHGA8-201ENST00000398604 IGKV1-5P01602 117 aa9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 DDTP30046 118 aa9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 SRSF7Q16629 238 aaKnown RBP eCLIP9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 IGKV2-40A0A087WW87 121 aaPredicted RBP9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 IGKV2D-40P01614 121 aaPredicted RBP9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 IGKV1-16P04430 117 aa9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 TRAV8-1A0A0A6YYK1 113 aa9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 STAG3L2P0CL84 134 aa9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 C20orf204Q6ZNR8 217 aa9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 UBE2E2Q96LR5 201 aa9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 ASCL2Q99929 193 aa9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 SEPSECSQ9HD40 501 aaKnown RBP9.45□□□□□ -0.9
PCDHGA8-201ENST00000398604 MPZP25189 248 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 PLP1P60201 277 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 SP5Q6BEB4 398 aaPredicted RBP9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 PVRIGQ6DKI7 326 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 POLQO75417 2590 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 IGHV3-53P01767 116 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 CACNG7P62955 275 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 LCNL1Q6ZST4 164 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 DNAH14Q0VDD8 3507 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 DNAL4O96015 105 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 ZNF415Q09FC8 603 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 Q8TAT8 98 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 GGTLC1Q9BX51 225 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 SLC25A39Q9BZJ4 359 aaPredicted RBP9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 K7ENP7 123 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 TPTE2P1Q5T6R2 138 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 C1QL4Q86Z23 238 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 OTORQ9NRC9 128 aa9.44□□□□□ -0.9
PCDHGA8-201ENST00000398604 FCN3O75636 299 aa9.43□□□□□ -0.9
PCDHGA8-201ENST00000398604 SAA4P35542 130 aa9.43□□□□□ -0.9
PCDHGA8-201ENST00000398604 C5orf64Q2M2E5 130 aa9.43□□□□□ -0.9
PCDHGA8-201ENST00000398604 SAMD13Q5VXD3 122 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms