RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CCDC71LQ8N9Z2 235 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 PINX1Q96BK5 328 aaKnown RBP8.73□□□□□ -1.01
TFF3-202ENST00000398431 HRH4Q9H3N8 390 aa8.73□□□□□ -1.01
TFF3-202ENST00000398431 DNASE2O00115 360 aaPredicted RBP8.72□□□□□ -1.01
TFF3-202ENST00000398431 ST8SIA3O43173 380 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 S100GP29377 79 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 MLANAQ16655 118 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 ZNF600Q6ZNG1 722 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 OR4A16Q8NH70 328 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 AQP10Q96PS8 301 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 TP53RKQ96S44 253 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 NAA60Q9H7X0 242 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 MRPL36Q9P0J6 103 aaKnown RBP8.72□□□□□ -1.01
TFF3-202ENST00000398431 PUS1Q9Y606 427 aaKnown RBP eCLIP8.72□□□□□ -1.01
TFF3-202ENST00000398431 X6R8D5 127 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 HECTD4Q9Y4D8 3996 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 PCLOQ9Y6V0 5065 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 DNAH17Q9UFH2 4485 aa8.72□□□□□ -1.01
TFF3-202ENST00000398431 ELOA3CA0A087WX78 387 aaPredicted RBP8.71□□□□□ -1.02
TFF3-202ENST00000398431 IGHV4-28A0A0C4DH34 117 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 C3orf85A0A1B0GTC6 90 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 ZNF705EA8MWA4 302 aaPredicted RBP8.71□□□□□ -1.02
TFF3-202ENST00000398431 C11orf94C9JXX5 98 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 K7EQG2 157 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 UCP1P25874 307 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 HLA-DMBP28068 263 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 SRPXP78539 464 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 ERHP84090 104 aaKnown RBP8.71□□□□□ -1.02
TFF3-202ENST00000398431 SPINK9Q5DT21 86 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 TRPT1Q86TN4 253 aaKnown RBP8.71□□□□□ -1.02
TFF3-202ENST00000398431 CSNK1G2-AS1Q8NCQ2 148 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 GLYATL2Q8WU03 294 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 SAT2Q96F10 170 aaPredicted RBP8.71□□□□□ -1.02
TFF3-202ENST00000398431 LINC00052Q96N35 136 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 GINS3Q9BRX5 216 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 GSKIPQ9P0R6 139 aa8.71□□□□□ -1.02
TFF3-202ENST00000398431 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 INS-IGF2F8WCM5 200 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 IGKV1-5P01602 117 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 HOXB5P09067 269 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 OR5AC1P0C628 307 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 P0C879 139 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 NPBWR1P48145 328 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 S100A10P60903 97 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 BLOC1S1P78537 153 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 IAH1Q2TAA2 248 aaPredicted RBP8.7□□□□□ -1.02
TFF3-202ENST00000398431 Q6ZTC4 211 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 LGI3Q8N145 548 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.7□□□□□ -1.02
TFF3-202ENST00000398431 LHFPL5Q8TAF8 219 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 RNF126Q9BV68 326 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 TMEM222Q9H0R3 208 aa8.7□□□□□ -1.02
TFF3-202ENST00000398431 FNDC4Q9H6D8 234 aaPredicted RBP8.7□□□□□ -1.02
TFF3-202ENST00000398431 BORCS7-ASMTA0A0B4J1R7 106 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 K7EPK0 472 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 ADAP1O75689 374 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 RNASE2P10153 161 aaKnown RBP8.69□□□□□ -1.02
TFF3-202ENST00000398431 MIFP14174 115 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 NPPCP23582 126 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 CRYBB3P26998 211 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 RPL11P62913 178 aaKnown RBP8.69□□□□□ -1.02
TFF3-202ENST00000398431 SP6Q3SY56 376 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 STHQ8IWL8 128 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 DCANP1Q8TF63 244 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 NARS2Q96I59 477 aaKnown RBP8.69□□□□□ -1.02
TFF3-202ENST00000398431 RABAC1Q9UI14 185 aa8.69□□□□□ -1.02
TFF3-202ENST00000398431 IGHV4-4A0A075B6R2 117 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 TRAV10A0A0B4J240 114 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 E5RGE8 158 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 CDS2O95674 445 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 APOC3P02656 99 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 BTN1A1Q13410 526 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 RAB32Q13637 225 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 MORN3Q6PF18 240 aaPredicted RBP8.68□□□□□ -1.02
TFF3-202ENST00000398431 SVBPQ8N300 66 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 GRAMD2BQ96HH9 432 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 CLEC5AQ9NY25 188 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 PRR13Q9NZ81 148 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 TMEM56-RWDD3S4R434 201 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 U3KQE9 123 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 FAT2Q9NYQ8 4349 aa8.68□□□□□ -1.02
TFF3-202ENST00000398431 A0A0G2JRQ6 117 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 A0A1W2PS18 150 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 CLN5O75503 358 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 SCO1O75880 301 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 IGKV1-17P01599 117 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 ZNF688P0C7X2 276 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 SPP1P10451 314 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 PVALBP20472 110 aaPredicted RBP8.67□□□□□ -1.02
TFF3-202ENST00000398431 RPL12P30050 165 aaKnown RBP8.67□□□□□ -1.02
TFF3-202ENST00000398431 SNCAP37840 140 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 P2RY1P47900 373 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 IL15RAQ13261 267 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 C12orf74Q32Q52 190 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 TMEM41BQ5BJD5 291 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 LINC00336Q6ZUF6 198 aa8.67□□□□□ -1.02
TFF3-202ENST00000398431 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms