RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SCGB1C1Q8TD33 95 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 RASL10AQ92737 203 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF581Q9P0T4 197 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 C5orf63A6NC05 138 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 CYSRT1A8MQ03 144 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 PMCHL1Q16048 86 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 Q6ZWC4 215 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 MRPL55Q7Z7F7 128 aaKnown RBP5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 EXPH5Q8NEV8 1989 aa5.37□□□□□ -1.55
TM9SF4-202ENST00000398022 MT-ND6P03923 174 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 FABP2P12104 132 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 MDKP21741 143 aaPredicted RBP5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 VDAC1P21796 283 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 HERVK_113P63121 156 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 FOXI1Q12951 378 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 PIGYQ3MUY2 71 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 FAM90A2PQ658T7 463 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 TMEM252Q8N6L7 170 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 OR10P1Q8NGE3 313 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 ATP6V0E2Q8NHE4 81 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 NABP1Q96AH0 204 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 TMEM70Q9BUB7 260 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 IGHV3-15A0A0B4J1V0 119 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 MYOD1P15172 320 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 RND3P61587 244 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 PNRC1Q12796 327 aaPredicted RBP5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 OR1C1Q15619 314 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 CLEC12BQ2HXU8 276 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 C1orf158Q8N1D5 194 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 OR10J6PQ8NGY7 276 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 SCRT1Q9BWW7 348 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 TRBV20-1A0A075B6N2 111 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF732B4DXR9 585 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 SPINT2O43291 252 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 DPM2O94777 84 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 CLDN14O95500 239 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 LOXP28300 417 aaPredicted RBP5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 MPV17LQ2QL34 196 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF506Q5JVG8 444 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 AAED1Q7RTV5 226 aa5.36□□□□□ -1.55
TM9SF4-202ENST00000398022 TMEM262E9PQX1 116 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 PGLYRP1O75594 196 aaPredicted RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 CST7O76096 145 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 SRP19P09132 144 aaKnown RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF32P17041 273 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 CRYGSP22914 178 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 DYNLT3P51808 116 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 SSX8Q7RTT4 187 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 PRRG4Q9BZD6 226 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 LIME1Q9H400 295 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 CHCHD2Q9Y6H1 151 aaPredicted RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 LIFP15018 202 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 RPS18P62269 152 aaKnown RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 RPL11P62913 178 aaKnown RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 SLC25A45Q8N413 288 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 CYYR1Q96J86 154 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 KCNIP2Q9NS61 270 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 SPTAN1Q13813 2472 aaKnown RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 J3QQQ9 107 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 NDUFB4O95168 129 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 RSPO1Q2MKA7 263 aaPredicted RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 PCSK4Q6UW60 755 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 C10orf126Q8N4M7 172 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 CYB561D1Q8N8Q1 229 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 DEFB124Q8NES8 71 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF502Q8TBZ5 544 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 CARD19Q96LW7 228 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 BBC3Q96PG8 261 aaPredicted RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 AGMATQ9BSE5 352 aa5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF331Q9NQX6 463 aaPredicted RBP5.35□□□□□ -1.55
TM9SF4-202ENST00000398022 ANKRD11Q6UB99 2663 aaPredicted RBP5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 OVOL1O14753 267 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 LINC00869P0C866 280 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 WT1P19544 449 aaPredicted RBP5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 SDK2Q58EX2 2172 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 LCN12Q6JVE5 192 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 BAGE3Q86Y29 109 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 BAGE2Q86Y30 109 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 C11orf45Q8TAV5 145 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 FOXB1Q99853 325 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 PYGO2Q9BRQ0 406 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 TMEM204Q9BSN7 226 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 ZFYVE26Q68DK2 2539 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 FLNBO75369 2602 aaKnown RBP5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 IGKV1-27A0A075B6S5 117 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 FAM236AA0A1B0GUQ0 79 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 FAM236BA0A1B0GV22 79 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 A0A1W2PPM0 123 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 TNFSF12O43508 249 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 HLA-DRB1P01911 266 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 HBG1P69891 147 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 HBG2P69892 147 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 C9orf153Q5TBE3 101 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 RPS19BP1Q86WX3 136 aaKnown RBP5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 MKXQ8IYA7 352 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 CT55Q8WUE5 264 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms