RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TRAV5A0A0B4J249 113 aa21.15■□□□□ 0.98
CPNE1-203ENST00000397442 PROK1P58294 105 aa21.15■□□□□ 0.98
CPNE1-203ENST00000397442 FAM167A-AS1Q96KT0 104 aa21.15■□□□□ 0.98
CPNE1-203ENST00000397442 CLPSL1A2RUU4 121 aa21.14■□□□□ 0.97
CPNE1-203ENST00000397442 CDX1P47902 265 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-203ENST00000397442 IL34Q6ZMJ4 242 aa21.14■□□□□ 0.97
CPNE1-203ENST00000397442 C18orf65Q6ZTR6 163 aa21.14■□□□□ 0.97
CPNE1-203ENST00000397442 MARC2Q969Z3 335 aa21.14■□□□□ 0.97
CPNE1-203ENST00000397442 SLC25A39Q9BZJ4 359 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-203ENST00000397442 IGHV3OR16-8A0A075B7F1 116 aa21.13■□□□□ 0.97
CPNE1-203ENST00000397442 I3L521 148 aa21.13■□□□□ 0.97
CPNE1-203ENST00000397442 ARL14EPLP0DKL9 152 aa21.13■□□□□ 0.97
CPNE1-203ENST00000397442 ZNF503Q96F45 646 aa21.13■□□□□ 0.97
CPNE1-203ENST00000397442 SLC25A2Q9BXI2 301 aa21.13■□□□□ 0.97
CPNE1-203ENST00000397442 TMPRSS5Q9H3S3 457 aa21.13■□□□□ 0.97
CPNE1-203ENST00000397442 C8orf88P0DMB2 117 aa21.12■□□□□ 0.97
CPNE1-203ENST00000397442 HIST2H2BDQ6DRA6 164 aa21.12■□□□□ 0.97
CPNE1-203ENST00000397442 TECRQ9NZ01 308 aaKnown RBP21.12■□□□□ 0.97
CPNE1-203ENST00000397442 HAX1O00165 279 aa21.12■□□□□ 0.97
CPNE1-203ENST00000397442 GGCTO75223 188 aaKnown RBP21.12■□□□□ 0.97
CPNE1-203ENST00000397442 CD28P10747 220 aa21.12■□□□□ 0.97
CPNE1-203ENST00000397442 SCRT1Q9BWW7 348 aa21.12■□□□□ 0.97
CPNE1-203ENST00000397442 NUDT19A8MXV4 375 aa21.11■□□□□ 0.97
CPNE1-203ENST00000397442 SHANK2-AS3Q9BTD1 123 aa21.11■□□□□ 0.97
CPNE1-203ENST00000397442 H3BRN7 92 aa21.1■□□□□ 0.97
CPNE1-203ENST00000397442 NDUFA4O00483 81 aa21.1■□□□□ 0.97
CPNE1-203ENST00000397442 CXorf1O96002 111 aa21.1■□□□□ 0.97
CPNE1-203ENST00000397442 LEMD1Q68G75 181 aa21.1■□□□□ 0.97
CPNE1-203ENST00000397442 UNQ9165/PRO28630Q6UXU0 137 aa21.1■□□□□ 0.97
CPNE1-203ENST00000397442 JMJD1CQ15652 2540 aa21.1■□□□□ 0.97
CPNE1-203ENST00000397442 TAS2R45P59539 299 aa21.09■□□□□ 0.97
CPNE1-203ENST00000397442 KHDC3LQ587J8 217 aa21.09■□□□□ 0.97
CPNE1-203ENST00000397442 C4orf3Q8WVX3 66 aa21.09■□□□□ 0.97
CPNE1-203ENST00000397442 C11orf44Q8N8P7 122 aa21.09■□□□□ 0.97
CPNE1-203ENST00000397442 WFDC12Q8WWY7 111 aa21.09■□□□□ 0.97
CPNE1-203ENST00000397442 FAM210AQ96ND0 272 aa21.09■□□□□ 0.97
CPNE1-203ENST00000397442 IGHV4OR15-8A0A075B7B6 117 aa21.08■□□□□ 0.96
CPNE1-203ENST00000397442 A0A087WW49 117 aa21.08■□□□□ 0.96
CPNE1-203ENST00000397442 RAB19A4D1S5 217 aa21.08■□□□□ 0.96
CPNE1-203ENST00000397442 GCHFRP30047 84 aa21.08■□□□□ 0.96
CPNE1-203ENST00000397442 SRSF3P84103 164 aaKnown RBP21.08■□□□□ 0.96
CPNE1-203ENST00000397442 PMS2P11Q13670 270 aa21.08■□□□□ 0.96
CPNE1-203ENST00000397442 PQLC2Q6ZP29 291 aa21.08■□□□□ 0.96
CPNE1-203ENST00000397442 RABAC1Q9UI14 185 aa21.08■□□□□ 0.96
CPNE1-203ENST00000397442 KHDC1LQ5JSQ8 128 aa21.07■□□□□ 0.96
CPNE1-203ENST00000397442 EIF4E3Q8N5X7 224 aaKnown RBP21.07■□□□□ 0.96
CPNE1-203ENST00000397442 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.07■□□□□ 0.96
CPNE1-203ENST00000397442 OR7C2O60412 319 aa21.06■□□□□ 0.96
CPNE1-203ENST00000397442 GPHB5Q86YW7 130 aa21.06■□□□□ 0.96
CPNE1-203ENST00000397442 IQCF2Q8IXL9 164 aa21.06■□□□□ 0.96
CPNE1-203ENST00000397442 TMEM190Q8WZ59 177 aa21.06■□□□□ 0.96
CPNE1-203ENST00000397442 CITED2Q99967 270 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-203ENST00000397442 GNG13Q9P2W3 67 aa21.06■□□□□ 0.96
CPNE1-203ENST00000397442 ZNF98A6NK75 572 aa21.05■□□□□ 0.96
CPNE1-203ENST00000397442 HSPB1P04792 205 aaKnown RBP21.05■□□□□ 0.96
CPNE1-203ENST00000397442 PSMB3P49720 205 aa21.05■□□□□ 0.96
CPNE1-203ENST00000397442 C20orf24Q9BUV8 137 aa21.05■□□□□ 0.96
CPNE1-203ENST00000397442 PYYP10082 97 aa21.05■□□□□ 0.96
CPNE1-203ENST00000397442 DEFB136Q30KP8 78 aa21.05■□□□□ 0.96
CPNE1-203ENST00000397442 ZNF207O43670 478 aaKnown RBP21.04■□□□□ 0.96
CPNE1-203ENST00000397442 OR10J4P0C629 311 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 GP9P14770 177 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 KRTAP10-3P60369 221 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 GUK1Q16774 197 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 HAGHQ16775 308 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 TOR2AQ5JU69 321 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 KLHL30-AS1Q8NEE0 82 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 SUN5Q8TC36 379 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 CITED4Q96RK1 184 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 RARRES2Q99969 163 aa21.04■□□□□ 0.96
CPNE1-203ENST00000397442 RBFOX3A6NFN3 312 aa21.03■□□□□ 0.96
CPNE1-203ENST00000397442 CRYBB3P26998 211 aa21.03■□□□□ 0.96
CPNE1-203ENST00000397442 RPEL1Q2QD12 228 aa21.03■□□□□ 0.96
CPNE1-203ENST00000397442 PAXXQ9BUH6 204 aa21.03■□□□□ 0.96
CPNE1-203ENST00000397442 OR51M1Q9H341 326 aa21.03■□□□□ 0.96
CPNE1-203ENST00000397442 U3KQE9 123 aa21.03■□□□□ 0.96
CPNE1-203ENST00000397442 A0A1B0GUS0 222 aa21.02■□□□□ 0.96
CPNE1-203ENST00000397442 S100A7AQ86SG5 101 aa21.02■□□□□ 0.96
CPNE1-203ENST00000397442 STXBP6Q8NFX7 210 aa21.02■□□□□ 0.96
CPNE1-203ENST00000397442 FXYD5Q96DB9 178 aa21.02■□□□□ 0.96
CPNE1-203ENST00000397442 METTL26Q96S19 204 aa21.02■□□□□ 0.96
CPNE1-203ENST00000397442 TMEM231Q9H6L2 316 aa21.02■□□□□ 0.96
CPNE1-203ENST00000397442 TSSC4Q9Y5U2 329 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-203ENST00000397442 APOHP02749 345 aaPredicted RBP21.02■□□□□ 0.95
CPNE1-203ENST00000397442 CD5P06127 495 aa21.02■□□□□ 0.95
CPNE1-203ENST00000397442 HOXD3P31249 432 aaPredicted RBP21.02■□□□□ 0.95
CPNE1-203ENST00000397442 TMEM14CQ9P0S9 112 aa21.02■□□□□ 0.95
CPNE1-203ENST00000397442 LOC102723971A0A1B0GUV8 181 aa21.01■□□□□ 0.95
CPNE1-203ENST00000397442 ZNF320A2RRD8 509 aa21.01■□□□□ 0.95
CPNE1-203ENST00000397442 MRPS12O15235 138 aaKnown RBP21.01■□□□□ 0.95
CPNE1-203ENST00000397442 BUB3O43684 328 aa21.01■□□□□ 0.95
CPNE1-203ENST00000397442 BCL2P10415 239 aa21.01■□□□□ 0.95
CPNE1-203ENST00000397442 NPPCP23582 126 aa21.01■□□□□ 0.95
CPNE1-203ENST00000397442 FAM106AQ4KMX7 169 aa21.01■□□□□ 0.95
CPNE1-203ENST00000397442 C8orf86Q6ZUL3 223 aa21.01■□□□□ 0.95
CPNE1-203ENST00000397442 EIF5A2Q9GZV4 153 aaKnown RBP21.01■□□□□ 0.95
CPNE1-203ENST00000397442 TMEM167BQ9NRX6 74 aa21.01■□□□□ 0.95
CPNE1-203ENST00000397442 UBE2L3P68036 154 aaKnown RBP21■□□□□ 0.95
CPNE1-203ENST00000397442 ICAM4Q14773 271 aa21■□□□□ 0.95
CPNE1-203ENST00000397442 ZNF506Q5JVG8 444 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms