RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 LY6G5BQ8NDX9 201 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 PLPPR1Q8TBJ4 325 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 C1QTNF4Q9BXJ3 329 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 PIN1P1O15428 100 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 PSPNO60542 156 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 WFDC6Q9BQY6 131 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 IFITM3Q01628 133 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 SAP25Q8TEE9 199 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 CHD5Q8TDI0 1954 aa10.18□□□□□ -0.78
SMU1-201ENST00000397149 EFNB3Q15768 340 aa10.17□□□□□ -0.78
SMU1-201ENST00000397149 NHLRC3Q5JS37 347 aa10.17□□□□□ -0.78
SMU1-201ENST00000397149 KLK9Q9UKQ9 250 aa10.17□□□□□ -0.78
SMU1-201ENST00000397149 RIPPLY2Q5TAB7 128 aa10.17□□□□□ -0.78
SMU1-201ENST00000397149 RPL18AQ02543 176 aaKnown RBP10.17□□□□□ -0.78
SMU1-201ENST00000397149 TRBV5-7A0A0A0MS05 114 aa10.17□□□□□ -0.78
SMU1-201ENST00000397149 TSKUQ8WUA8 353 aa10.17□□□□□ -0.78
SMU1-201ENST00000397149 MIA3Q5JRA6 1907 aa10.17□□□□□ -0.78
SMU1-201ENST00000397149 SPATA25Q9BR10 227 aa10.17□□□□□ -0.78
SMU1-201ENST00000397149 SEC61GP60059 68 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 ANGP03950 147 aaKnown RBP10.16□□□□□ -0.78
SMU1-201ENST00000397149 SPATA31B1PQ5VZV4 182 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 RNF166Q96A37 237 aaPredicted RBP10.16□□□□□ -0.78
SMU1-201ENST00000397149 NPDC1Q9NQX5 325 aaPredicted RBP10.16□□□□□ -0.78
SMU1-201ENST00000397149 RNF114Q9Y508 228 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 MORN2Q502X0 79 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 TIMP3P35625 211 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 ZNF124Q15973 351 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 IGF2BP2-AS1Q96M15 143 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 LIME1Q9H400 295 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 LIMS1P48059 325 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 VWC2Q2TAL6 325 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 ZC2HC1BQ5TFG8 222 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 IGKV1-8A0A0C4DH67 115 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 SMPXQ9UHP9 88 aa10.16□□□□□ -0.78
SMU1-201ENST00000397149 TRAV9-1A0A075B6T8 112 aa10.15□□□□□ -0.78
SMU1-201ENST00000397149 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.78
SMU1-201ENST00000397149 SRSF3P84103 164 aaKnown RBP10.15□□□□□ -0.78
SMU1-201ENST00000397149 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.15□□□□□ -0.78
SMU1-201ENST00000397149 OSTCQ9NRP0 149 aa10.15□□□□□ -0.78
SMU1-201ENST00000397149 TMEM14DPA8MWL7 114 aa10.15□□□□□ -0.78
SMU1-201ENST00000397149 SPINK13Q1W4C9 94 aa10.15□□□□□ -0.78
SMU1-201ENST00000397149 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.78
SMU1-201ENST00000397149 CEP290O15078 2479 aa10.15□□□□□ -0.79
SMU1-201ENST00000397149 PQLC2LA1A4F0 135 aa10.15□□□□□ -0.79
SMU1-201ENST00000397149 STPG4Q8N801 248 aa10.15□□□□□ -0.79
SMU1-201ENST00000397149 ZNF837Q96EG3 531 aaPredicted RBP10.15□□□□□ -0.79
SMU1-201ENST00000397149 ZMAT4Q9H898 229 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 AZU1P20160 251 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 TEX38Q6PEX7 206 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 VSIRQ9H7M9 311 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 GNLYP22749 145 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 ID3Q02535 119 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 ATRAIDQ6UW56 229 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 A0A1W2PR77 199 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 TNFSF13O75888 250 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 IGKV1-39P01597 117 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 IGKV1D-39P04432 117 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 ALPK2Q86TB3 2170 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 PLCH1Q4KWH8 1693 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 A0A0J9YY99 117 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 A8MWP6 167 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 AMN1Q8IY45 258 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 ANKRD31Q8N7Z5 1873 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 CRYBA4P53673 196 aa10.14□□□□□ -0.79
SMU1-201ENST00000397149 SUPT4H1P63272 117 aaKnown RBP10.14□□□□□ -0.79
SMU1-201ENST00000397149 RTBDNQ9BSG5 229 aaPredicted RBP10.14□□□□□ -0.79
SMU1-201ENST00000397149 MYO5AQ9Y4I1 1855 aaKnown RBP10.13□□□□□ -0.79
SMU1-201ENST00000397149 IGKV1D-13A0A0B4J2D9 117 aa10.13□□□□□ -0.79
SMU1-201ENST00000397149 IGKV1-13P0DP09 117 aa10.13□□□□□ -0.79
SMU1-201ENST00000397149 ZNF407Q9C0G0 2248 aa10.13□□□□□ -0.79
SMU1-201ENST00000397149 CD160O95971 181 aa10.13□□□□□ -0.79
SMU1-201ENST00000397149 IGKV1D-43A0A0B4J1Z2 117 aa10.13□□□□□ -0.79
SMU1-201ENST00000397149 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
SMU1-201ENST00000397149 RHPN1-AS1Q9BWJ2 59 aa10.13□□□□□ -0.79
SMU1-201ENST00000397149 ZNRF2Q8NHG8 242 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 TP53TG1Q9Y2A0 90 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 IGHV2-26A0A0B4J1V2 119 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 DOCK7Q96N67 2140 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 ABCA7Q8IZY2 2146 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 SPTBN2O15020 2390 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 PRSS57Q6UWY2 283 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 TIAM2Q8IVF5 1701 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 ZNF672Q499Z4 452 aaPredicted RBP10.12□□□□□ -0.79
SMU1-201ENST00000397149 IFITM1P13164 125 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 RNF183Q96D59 192 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 TMEM242Q9NWH2 141 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 MAST2Q6P0Q8 1798 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 YLPM1P49750 1951 aaKnown RBP10.12□□□□□ -0.79
SMU1-201ENST00000397149 SIGLEC9Q9Y336 463 aa10.12□□□□□ -0.79
SMU1-201ENST00000397149 LY6HO94772 140 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 TRIP12Q14669 1992 aaPredicted RBP10.11□□□□□ -0.79
SMU1-201ENST00000397149 LAMB1P07942 1786 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 A0A087WWC5 75 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 GAGE12HA6NDE8 117 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 RNF223E7ERA6 249 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 YPEL1O60688 119 aa10.11□□□□□ -0.79
SMU1-201ENST00000397149 RMI2Q96E14 147 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms