RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 M0R2Z0 102 aa10.37□□□□□ -0.75
SEC13-206ENST00000397102 CDS2O95674 445 aa10.37□□□□□ -0.75
SEC13-206ENST00000397102 AZU1P20160 251 aa10.37□□□□□ -0.75
SEC13-206ENST00000397102 RPS19P39019 145 aaKnown RBP10.37□□□□□ -0.75
SEC13-206ENST00000397102 LYZP61626 148 aa10.37□□□□□ -0.75
SEC13-206ENST00000397102 DLK1P80370 383 aa10.37□□□□□ -0.75
SEC13-206ENST00000397102 RNASE10Q5GAN6 216 aaKnown RBP10.37□□□□□ -0.75
SEC13-206ENST00000397102 ZFAND1Q8TCF1 268 aa10.37□□□□□ -0.75
SEC13-206ENST00000397102 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
SEC13-206ENST00000397102 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
SEC13-206ENST00000397102 IGKV1D-37A0A075B6S9 117 aa10.36□□□□□ -0.75
SEC13-206ENST00000397102 ZFP92A6NM28 416 aa10.36□□□□□ -0.75
SEC13-206ENST00000397102 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
SEC13-206ENST00000397102 CNN1P51911 297 aaKnown RBP10.36□□□□□ -0.75
SEC13-206ENST00000397102 ZNF90Q03938 601 aa10.36□□□□□ -0.75
SEC13-206ENST00000397102 GPR141Q7Z602 305 aa10.36□□□□□ -0.75
SEC13-206ENST00000397102 LHFPL5Q8TAF8 219 aa10.36□□□□□ -0.75
SEC13-206ENST00000397102 RBPMSQ93062 196 aaKnown RBP10.36□□□□□ -0.75
SEC13-206ENST00000397102 PPP1R14BQ96C90 147 aa10.36□□□□□ -0.75
SEC13-206ENST00000397102 ZNF503Q96F45 646 aa10.36□□□□□ -0.75
SEC13-206ENST00000397102 MYCBP2O75592 4640 aa10.36□□□□□ -0.75
SEC13-206ENST00000397102 APOA1P02647 267 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 FABP1P07148 127 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 OR5AC1P0C628 307 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 BAP18Q8IXM2 172 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 OR13C8Q8NGS7 320 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 GLYATL2Q8WU03 294 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 GNPNAT1Q96EK6 184 aaPredicted RBP10.35□□□□□ -0.75
SEC13-206ENST00000397102 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 ZNF586Q9NXT0 402 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 CACFD1Q9UGQ2 172 aa10.35□□□□□ -0.75
SEC13-206ENST00000397102 SNRPGP15A8MWD9 76 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 CD3DP04234 171 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 GALR1P47211 349 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 NEDD8Q15843 81 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 Q6ZRN7 208 aaPredicted RBP10.34□□□□□ -0.75
SEC13-206ENST00000397102 SELENOHQ8IZQ5 122 aaKnown RBP10.34□□□□□ -0.75
SEC13-206ENST00000397102 TMEM256Q8N2U0 113 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 TERB2Q8NHR7 220 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 RXFP4Q8TDU9 374 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 C16orf74Q96GX8 76 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 C18orf15Q96N68 181 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
SEC13-206ENST00000397102 TIMM8BQ9Y5J9 83 aaPredicted RBP10.34□□□□□ -0.75
SEC13-206ENST00000397102 U3KQ87 197 aa10.34□□□□□ -0.75
SEC13-206ENST00000397102 FLG2Q5D862 2391 aaPredicted RBP10.34□□□□□ -0.75
SEC13-206ENST00000397102 VPS13BQ7Z7G8 4022 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 TEX13DA0A0J9YY54 714 aaPredicted RBP10.33□□□□□ -0.76
SEC13-206ENST00000397102 TBPP20226 339 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 LINC00315P59091 139 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 TAS2R60P59551 318 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 GAMTQ14353 236 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 MEF2DQ14814 521 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 ESRGQ1W209 222 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 MARCH1Q8TCQ1 289 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 SLC35E1Q96K37 410 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 C17orf77Q96MU5 243 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 LINC01587Q99440 93 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 SLC25A32Q9H2D1 315 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 COMMD3Q9UBI1 195 aa10.33□□□□□ -0.76
SEC13-206ENST00000397102 TRAV12-2A0A075B6T6 113 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 BOLA2-SMG1P6H3BVE0 249 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 GABARAPH6UMI1 98 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 EREGO14944 169 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 GABARAPO95166 117 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 TNFAIP8O95379 198 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 M6PRP20645 277 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 GPX4P36969 197 aaPredicted RBP10.32□□□□□ -0.76
SEC13-206ENST00000397102 OR5I1Q13606 314 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 OR2F1Q13607 317 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 RNASE12Q5GAN4 147 aaKnown RBP10.32□□□□□ -0.76
SEC13-206ENST00000397102 TMEM268Q5VZI3 342 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 LGI3Q8N145 548 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 RSG1Q9BU20 258 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 NAA60Q9H7X0 242 aa10.32□□□□□ -0.76
SEC13-206ENST00000397102 SULT1A3P0DMM9 295 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 SULT1A4P0DMN0 295 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 ZNF182P17025 639 aaPredicted RBP10.31□□□□□ -0.76
SEC13-206ENST00000397102 SCGB2B2Q4G0G5 96 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 ZNF493Q6ZR52 646 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 TMEM144Q7Z5S9 345 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 OR4D10Q8NGI6 311 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 DTD1Q8TEA8 209 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 TRGV9Q99603 122 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 SLC25A22Q9H936 323 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 NOP10Q9NPE3 64 aaKnown RBP10.31□□□□□ -0.76
SEC13-206ENST00000397102 SLC45A2Q9UMX9 530 aa10.31□□□□□ -0.76
SEC13-206ENST00000397102 C14orf166Q9Y224 244 aaKnown RBP10.31□□□□□ -0.76
SEC13-206ENST00000397102 A0A0J9YY99 117 aa10.3□□□□□ -0.76
SEC13-206ENST00000397102 ZNF98A6NK75 572 aa10.3□□□□□ -0.76
SEC13-206ENST00000397102 H3BNG1 76 aa10.3□□□□□ -0.76
SEC13-206ENST00000397102 ZNF701M0R085 212 aaPredicted RBP10.3□□□□□ -0.76
SEC13-206ENST00000397102 FUSP35637 526 aaKnown RBP eCLIP10.3□□□□□ -0.76
SEC13-206ENST00000397102 ATP5IP56385 69 aaPredicted RBP10.3□□□□□ -0.76
SEC13-206ENST00000397102 ERVFC1-1P60608 527 aa10.3□□□□□ -0.76
SEC13-206ENST00000397102 LSM3P62310 102 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms