RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 HBBP68871 147 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 PDPNQ86YL7 162 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 NBL1P41271 181 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 DLX6P56179 175 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 IGF2-ASQ6U949 168 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 KLK10O43240 276 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 TOX4O94842 621 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 EXOC3-AS1Q8N2X6 119 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 C17orf77Q96MU5 243 aa11.1□□□□□ -0.63
NUP98-204ENST00000397004 ZNF292O60281 2723 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 IGHV2-70DA0A0C4DH43 119 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 TAX1BP3O14907 124 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 TCRAP04437 139 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 ATP5L2Q7Z4Y8 100 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 OR1L4Q8NGR5 311 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 CBY1Q9Y3M2 126 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 ADIPOQQ15848 244 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 APOA2P02652 100 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 FAM106CPP0CH98 169 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 FAM106AQ4KMX7 169 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 Q9H3A6 140 aa11.09□□□□□ -0.63
NUP98-204ENST00000397004 NPIPB6E9PJ23 425 aa11.08□□□□□ -0.64
NUP98-204ENST00000397004 RBMXL3Q8N7X1 1067 aaKnown RBP11.08□□□□□ -0.64
NUP98-204ENST00000397004 IGFBPL1Q8WX77 278 aa11.08□□□□□ -0.64
NUP98-204ENST00000397004 RAB9BQ9NP90 201 aa11.08□□□□□ -0.64
NUP98-204ENST00000397004 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.64
NUP98-204ENST00000397004 NCR2O95944 276 aa11.08□□□□□ -0.64
NUP98-204ENST00000397004 LOC102724200A0A096LPH7 203 aaPredicted RBP11.07□□□□□ -0.64
NUP98-204ENST00000397004 K7EP13 123 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 LOXP28300 417 aaPredicted RBP11.07□□□□□ -0.64
NUP98-204ENST00000397004 FBLN7Q53RD9 439 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 C16orf54Q6UWD8 224 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
NUP98-204ENST00000397004 ZADH2Q8N4Q0 377 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 ZNF738Q8NE65 137 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 POLEQ07864 2286 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 BPIFB3P59826 476 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 OR10X1Q8NGY0 326 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 OR2T8A6NH00 312 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 CRIP1P50238 77 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 BVES-AS1Q5T3Y7 98 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 TMEM116Q8NCL8 245 aa11.07□□□□□ -0.64
NUP98-204ENST00000397004 NEU4Q8WWR8 484 aaPredicted RBP11.07□□□□□ -0.64
NUP98-204ENST00000397004 H1FXQ92522 213 aaKnown RBP11.07□□□□□ -0.64
NUP98-204ENST00000397004 MUC21A0A0G2JKD1 596 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 MUC21A0A140T8X8 626 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 CRYGBP07316 175 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 MUC21Q5SSG8 566 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 TEX45Q8NA69 505 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 GAL3ST2Q9H3Q3 398 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 SCRT2Q9NQ03 307 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 CEACAM4O75871 244 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 C1RLQ9NZP8 487 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 C17orf100A8MU93 164 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 TMEM178BH3BS89 294 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 NUDT3O95989 172 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 P01737 135 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 HOXB4P17483 251 aaPredicted RBP11.06□□□□□ -0.64
NUP98-204ENST00000397004 LOXL1Q08397 574 aaPredicted RBP11.06□□□□□ -0.64
NUP98-204ENST00000397004 C3orf36Q3SXR2 165 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 WASHC3Q9Y3C0 194 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 APC2O95996 2303 aa11.06□□□□□ -0.64
NUP98-204ENST00000397004 LEPROTL1O95214 131 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 THBDP07204 575 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 MEF2CQ06413 473 aaPredicted RBP11.05□□□□□ -0.64
NUP98-204ENST00000397004 Q86TA4 180 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 CCL17Q92583 94 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 PERPQ96FX8 193 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 TEX22C9J3V5 150 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 H0Y8G0 127 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 TNFSF4P23510 183 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 OR4A5Q8NH83 315 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 TRGV9Q99603 122 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 A0A087X0K7 114 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 A0A096LNJ9 63 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 ARMS2P0C7Q2 107 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 PSG1P11464 419 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 RBPMS2Q6ZRY4 209 aaKnown RBP11.05□□□□□ -0.64
NUP98-204ENST00000397004 C5orf17Q8NAS9 161 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 ZNF492Q9P255 531 aa11.05□□□□□ -0.64
NUP98-204ENST00000397004 CSN3P07498 182 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 C2orf91Q6ZV80 131 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 HRNRQ86YZ3 2850 aaPredicted RBP11.04□□□□□ -0.64
NUP98-204ENST00000397004 A8MWL6 223 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 SNAI2O43623 268 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 CT83Q5H943 113 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 FMC1Q96HJ9 113 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 NDFIP1Q9BT67 221 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 ZGRF1Q86YA3 2104 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 ENSAO43768 121 aaKnown RBP11.04□□□□□ -0.64
NUP98-204ENST00000397004 TMEM30BQ3MIR4 351 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 LRRC10Q5BKY1 277 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 LDLRAD2Q5SZI1 272 aa11.04□□□□□ -0.64
NUP98-204ENST00000397004 TPRP12270 2363 aaKnown RBP11.04□□□□□ -0.64
NUP98-204ENST00000397004 IGLC1P0CG04 106 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 GOLT1AQ6ZVE7 132 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 LINC00311Q8N616 119 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms