RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MGST2Q99735 147 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 RSG1Q9BU20 258 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 SLC25A32Q9H2D1 315 aa7.81□□□□□ -1.16
NEDD8-202ENST00000396828 PEF1Q9UBV8 284 aaKnown RBP7.81□□□□□ -1.16
NEDD8-202ENST00000396828 ZP3P21754 424 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 RPL29P47914 159 aaKnown RBP7.8□□□□□ -1.16
NEDD8-202ENST00000396828 SELENOTP62341 195 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 SERF2P84101 59 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 ALKAL2Q6UX46 152 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 ZNF767PQ75MW2 155 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 ZNF680Q8NEM1 530 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 ZNF502Q8TBZ5 544 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 TRGV9Q99603 122 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 SH3BGRL3Q9H299 93 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 UBQLN2Q9UHD9 624 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 SELENOKQ9Y6D0 94 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 S4R3C0 116 aa7.8□□□□□ -1.16
NEDD8-202ENST00000396828 IGKV1OR2-108A0A075B7D4 117 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 OR2T8A6NH00 312 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 UMAD1C9J7I0 102 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 NUPL2O15504 423 aaKnown RBP7.79□□□□□ -1.16
NEDD8-202ENST00000396828 CFDP00746 253 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-202ENST00000396828 IGHV3-23P01764 117 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 MBP02144 154 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 RAB5CP51148 216 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 IFITM2Q01629 132 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 AKR1C8PQ5T2L2 129 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 LINC00322Q6ZN03 302 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-202ENST00000396828 TMEM182Q6ZP80 229 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-202ENST00000396828 Q6ZRG5 221 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 CYP2G1PQ6ZSU1 146 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 LRRC20Q8TCA0 184 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 RNF141Q8WVD5 230 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 FAM110AQ9BQ89 295 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 SPATA25Q9BR10 227 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 GGTLC1Q9BX51 225 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 WFDC10AQ9H1F0 79 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 MRPL36Q9P0J6 103 aaKnown RBP7.79□□□□□ -1.16
NEDD8-202ENST00000396828 PXMP4Q9Y6I8 212 aa7.79□□□□□ -1.16
NEDD8-202ENST00000396828 IGKV1D-37A0A075B6S9 117 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 BMPR1BO00238 502 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 CLEC3BP05452 202 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 RD3LP0DJH9 198 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 GPR183P32249 361 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 ELLP55199 621 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-202ENST00000396828 RAB14P61106 215 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 YPEL3P61236 119 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-202ENST00000396828 B2MP61769 119 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 ZNF90Q03938 601 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 ACOT6Q3I5F7 207 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-202ENST00000396828 TIGITQ495A1 244 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 FFAR4Q5NUL3 377 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 MIC13Q5XKP0 118 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 SPSB3Q6PJ21 355 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 CLEC19AQ6UXS0 136 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 STPG3Q8N7X2 389 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 BPIFCQ8NFQ6 507 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 Q8WTZ3 238 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 SLC39A9Q9NUM3 307 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 SLC45A2Q9UMX9 530 aa7.78□□□□□ -1.16
NEDD8-202ENST00000396828 KMT2AQ03164 3969 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.77□□□□□ -1.17
NEDD8-202ENST00000396828 RBMY1BA6NDE4 496 aaKnown RBP7.77□□□□□ -1.17
NEDD8-202ENST00000396828 RBMY1EA6NEQ0 496 aaKnown RBP7.77□□□□□ -1.17
NEDD8-202ENST00000396828 ZNF785A8K8V0 405 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 F8W735 103 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-202ENST00000396828 RGS13O14921 159 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 TGOLN2O43493 480 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 TOMM40O96008 361 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 CD7P09564 240 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 RBMY1DP0C7P1 496 aaKnown RBP7.77□□□□□ -1.17
NEDD8-202ENST00000396828 LINC00869P0C866 280 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 ARL3P36405 182 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 SULT1A2P50226 295 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 RELQ04864 619 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-202ENST00000396828 RPEL1Q2QD12 228 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 CD300EQ496F6 205 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-202ENST00000396828 TMEM41BQ5BJD5 291 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 FAM74A1Q5RGS3 127 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 PXDC1Q5TGL8 231 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 DPPA3Q6W0C5 159 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 DEFB125Q8N687 156 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 TUBA4BQ9H853 241 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 SIGLEC8Q9NYZ4 499 aa7.77□□□□□ -1.17
NEDD8-202ENST00000396828 ZNF705EA8MWA4 302 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-202ENST00000396828 PPP5D1E7EU14 171 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 IGKV1-17P01599 117 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 CTSGP08311 255 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 PSG1P11464 419 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 M6PRP20645 277 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 CD81P60033 236 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 PRR20EP86478 221 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 PRR20CP86479 221 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 PRR20DP86480 221 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 PRR20BP86481 221 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 PRR20AP86496 221 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 LCN12Q6JVE5 192 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 ZNF600Q6ZNG1 722 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms