RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ATF4P18848 351 aaPredicted RBP13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 GATA2P23769 480 aaPredicted RBP13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 SELENOTP62341 195 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 FAM78BQ5VT40 261 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 MIR17HGQ75NE6 70 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 C5orf56Q8N8D9 126 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 TMEM116Q8NCL8 245 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 WFDC9Q8NEX5 89 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 MISP3Q96FF7 219 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 RNF2Q99496 336 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 MRPL32Q9BYC8 188 aaKnown RBP13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 DMRT1Q9Y5R6 373 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 NPIPB5A8MRT5 1133 aa13.58□□□□□ -0.24
TNFSF13-205ENST00000396545 ZNF727A8MUV8 499 aa13.58□□□□□ -0.24
TNFSF13-205ENST00000396545 PDE6DO43924 150 aa13.58□□□□□ -0.24
TNFSF13-205ENST00000396545 CTRB1P17538 263 aa13.58□□□□□ -0.24
TNFSF13-205ENST00000396545 RND2P52198 227 aa13.58□□□□□ -0.24
TNFSF13-205ENST00000396545 CTRB2Q6GPI1 263 aa13.58□□□□□ -0.24
TNFSF13-205ENST00000396545 OR5AU1Q8NGC0 362 aa13.58□□□□□ -0.24
TNFSF13-205ENST00000396545 ARL2-SNX15V9GYD0 113 aa13.58□□□□□ -0.24
TNFSF13-205ENST00000396545 IGHV7-81A0A0B4J1V7 117 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 F6UZH7 168 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 CLN5O75503 358 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 ATP5G3P48201 142 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 C19orf35Q6ZS72 473 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 TMEM37Q8WXS4 190 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 YPEL4Q96NS1 127 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 TRGV9Q99603 122 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 SMIM7Q9BQ49 75 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 PARLQ9H300 379 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 TECRQ9NZ01 308 aaKnown RBP13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
TNFSF13-205ENST00000396545 A0A1W2PRX2 142 aa13.56□□□□□ -0.24
TNFSF13-205ENST00000396545 NPPCP23582 126 aa13.56□□□□□ -0.24
TNFSF13-205ENST00000396545 TTC9CQ8N5M4 171 aa13.56□□□□□ -0.24
TNFSF13-205ENST00000396545 HIST1H2BAQ96A08 127 aa13.56□□□□□ -0.24
TNFSF13-205ENST00000396545 ZNF503Q96F45 646 aa13.56□□□□□ -0.24
TNFSF13-205ENST00000396545 I3L2K1 104 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 IGHV3-48P01763 117 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 APELAP0DMC3 54 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 FOLR2P14207 255 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 IGLL1P15814 213 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 CD33P20138 364 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 TAS2R45P59539 299 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 UBE2G2P60604 165 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 PQLC2Q6ZP29 291 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 OR1L4Q8NGR5 311 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 PFDN5Q99471 154 aa13.55□□□□□ -0.24
TNFSF13-205ENST00000396545 MT-ND4LP03901 98 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 C8orf88P0DMB2 117 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 PF4V1P10720 104 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 ZNF90Q03938 601 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 TMEM241Q24JQ0 296 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 CST9LP1Q5W188 147 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 ISOC2Q96AB3 205 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 RPUSD4Q96CM3 377 aaKnown RBP13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 DNAJC4Q9NNZ3 241 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 TMEM167BQ9NRX6 74 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 TMEM242Q9NWH2 141 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 YTHDF2Q9Y5A9 579 aaKnown RBP13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 OR2C1O95371 312 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 CRIP2P52943 208 aaPredicted RBP13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 PATE2Q6UY27 113 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 FAM167A-AS1Q96KT0 104 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 THYN1Q9P016 225 aa13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 TSSC4Q9Y5U2 329 aaPredicted RBP13.54□□□□□ -0.24
TNFSF13-205ENST00000396545 KMT2CQ8NEZ4 4911 aaKnown RBP13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 TENM3Q9P273 2699 aa13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 AMY1AP04745 511 aa13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 HIST1H1BP16401 226 aaKnown RBP13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 NDPQ00604 133 aa13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 KLK9Q2XQG4 91 aa13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 RNF212Q495C1 297 aa13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 OR4X1Q8NH49 305 aa13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 KLK9Q9UKQ9 250 aa13.53□□□□□ -0.24
TNFSF13-205ENST00000396545 COX7A2P2O60397 106 aa13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 EGR2P11161 476 aaPredicted RBP13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 PLP1P60201 277 aa13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 RPL23P62829 140 aaKnown RBP13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 ZNF674Q2M3X9 581 aa13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 ASPHD1Q5U4P2 390 aa13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 MORN5Q5VZ52 161 aa13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 C11orf52Q96A22 123 aa13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 SLC25A2Q9BXI2 301 aa13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 DOK5Q9P104 306 aa13.52□□□□□ -0.25
TNFSF13-205ENST00000396545 ELOA3CA0A087WX78 387 aaPredicted RBP13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 K7EIM0 57 aa13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 C10orf113Q5VZT2 155 aa13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 OR4X2Q8NGF9 303 aa13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 OR51G1Q8NGK1 321 aa13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 HSPB9Q9BQS6 159 aa13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 FAM103A1Q9BTL3 118 aaKnown RBP13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 CTDSP1Q9GZU7 261 aa13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 ZNF580Q9UK33 172 aa13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 PRELID1Q9Y255 219 aa13.51□□□□□ -0.25
TNFSF13-205ENST00000396545 K7EIL1 84 aa13.5□□□□□ -0.25
TNFSF13-205ENST00000396545 IGHG2P01859 326 aa13.5□□□□□ -0.25
TNFSF13-205ENST00000396545 PF4P02776 101 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms