RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 SRIP30626 198 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 RPL27AP46776 148 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 MFAP2P55001 183 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 PAX2Q02962 417 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 TMEM116Q8NCL8 245 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 CHRDL1Q9BU40 450 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 ZNF331Q9NQX6 463 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 NBASA2RRP1 2371 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 POLEQ07864 2286 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 IGHV3-72A0A0B4J1Y9 119 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 MOSP00540 346 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 RUSC1-AS1Q66K80 236 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 HCP5Q6MZN7 132 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 NUDT10Q8NFP7 164 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 SMIM12Q96EX1 92 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 NUDT11Q96G61 164 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 C7orf69Q9H7B7 122 aa12.79□□□□□ -0.36
CCHCR1-202ENST00000396263 PLAUP00749 431 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 IGLV1-47P01700 117 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 APCSP02743 223 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 RBPJQ06330 500 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 LDLRAD2Q5SZI1 272 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 NIT1Q86X76 327 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 OR2D3Q8NGH3 330 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 SSBP3Q9BWW4 388 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 EPDR1Q9UM22 224 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 IGHV2-26A0A0B4J1V2 119 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 ORM2P19652 201 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 APOBEC3AP31941 199 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 LCN12Q6JVE5 192 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 FAM19A2Q8N3H0 131 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 OR1B1Q8NGR6 318 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 MRPS16Q9Y3D3 137 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 KLF12Q9Y4X4 402 aa12.78□□□□□ -0.36
CCHCR1-202ENST00000396263 TPRP12270 2363 aaKnown RBP12.77□□□□□ -0.36
CCHCR1-202ENST00000396263 MALRD1Q5VYJ5 2156 aa12.77□□□□□ -0.36
CCHCR1-202ENST00000396263 B9A039 149 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 CORTO00230 105 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 LY6DQ14210 128 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 TNXAQ16473 311 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 SMIM15Q7Z3B0 74 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 NUP35Q8NFH5 326 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 TP73-AS1Q9UF72 201 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 RALYQ9UKM9 306 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 SIGLEC9Q9Y336 463 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 HIST1H1EP10412 219 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 PRRX1P54821 245 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 PLP1P60201 277 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 GNG5P63218 68 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 SLAQ13239 276 aa12.77□□□□□ -0.37
CCHCR1-202ENST00000396263 ZNF324O75467 553 aaPredicted RBP12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 CNTFRP26992 372 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 UBE2G1P62253 170 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 KLHDC1Q8N7A1 406 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 OR4F17Q8NGA8 305 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 TSKUQ8WUA8 353 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 IGHV1-3A0A0C4DH29 117 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 SLC25A5P05141 298 aaKnown RBP12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 NBEAP1P0C6P0 100 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 VAMP3Q15836 100 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 ASPHD1Q5U4P2 390 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 ZNF841Q6ZN19 808 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 CST9LQ9H4G1 147 aa12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 MRPL27Q9P0M9 148 aaKnown RBP12.76□□□□□ -0.37
CCHCR1-202ENST00000396263 COL6A6A6NMZ7 2263 aa12.75□□□□□ -0.37
CCHCR1-202ENST00000396263 TRAV30A0A087WSZ9 112 aa12.75□□□□□ -0.37
CCHCR1-202ENST00000396263 GP9P14770 177 aa12.75□□□□□ -0.37
CCHCR1-202ENST00000396263 BLNKQ8WV28 456 aa12.75□□□□□ -0.37
CCHCR1-202ENST00000396263 MLST8Q9BVC4 326 aa12.75□□□□□ -0.37
CCHCR1-202ENST00000396263 INSIG2Q9Y5U4 225 aa12.75□□□□□ -0.37
CCHCR1-202ENST00000396263 F11RQ9Y624 299 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-202ENST00000396263 PGPA6NDG6 321 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 BUB1B-PAK6H3BSN5 160 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 OCIAD2Q56VL3 154 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 C19orf35Q6ZS72 473 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 PPP1R27Q86WC6 154 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 C8orf46Q8TAG6 207 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 GPR82Q96P67 336 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 VKORC1Q9BQB6 163 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 CLEC7AQ9BXN2 247 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 TEX22C9J3V5 150 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 CD3EP07766 207 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 TMEM11P17152 192 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 CA7P43166 264 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 GDF5OSQ5U4N7 250 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 PRR27Q6MZM9 219 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 ATP5L2Q7Z4Y8 100 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 C18orf32Q8TCD1 76 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 CSTL1Q9H114 145 aa12.74□□□□□ -0.37
CCHCR1-202ENST00000396263 RBP4P02753 201 aa12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 PSG1P11464 419 aa12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 C5orf17Q8NAS9 161 aa12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 LOC102724200A0A096LPH7 203 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 HIGD1CA8MV81 97 aa12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 OR2J3O76001 311 aa12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 NTF3P20783 257 aa12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 DLX1P56177 255 aa12.73□□□□□ -0.37
CCHCR1-202ENST00000396263 APELAP0DMC3 54 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms