RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 PITPNC1Q9UKF7 332 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 HIGD1AQ9Y241 93 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 VPS13CQ709C8 3753 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 IGHV7-81A0A0B4J1V7 117 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 HELTA6NFD8 242 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 ZNF705GA8MUZ8 300 aaPredicted RBP9.58□□□□□ -0.88
ITGB1-202ENST00000396033 DLEU1O43261 78 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 S4R3C0 116 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 IGLV11-55A0A075B6I3 123 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 KIR2DL5BA0A0G2JN68 375 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 KIR2DL5BA0A0G2JPC4 375 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 A0A1W2PPQ1 181 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 IGKV1-17P01599 117 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 GNG4P50150 75 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 CENPWQ5EE01 88 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 KIR2DL5AQ8N109 375 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 TTC9CQ8N5M4 171 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 NRGNQ92686 78 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 PYGO2Q9BRQ0 406 aa9.58□□□□□ -0.88
ITGB1-202ENST00000396033 SRP14P37108 136 aaKnown RBP9.57□□□□□ -0.88
ITGB1-202ENST00000396033 KCNIP4Q6PIL6 250 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 SPG11Q96JI7 2443 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 HLA-DRB1P01911 266 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 LINC00310P59036 64 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 LEMD1Q68G75 181 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 BLNKQ8WV28 456 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 RNF114Q9Y508 228 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 TRAV40A0A0B4J280 105 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 K7EN84 100 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 TGOLN2O43493 480 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 COX6B1P14854 86 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 LY96Q9Y6Y9 160 aa9.57□□□□□ -0.88
ITGB1-202ENST00000396033 UTP20O75691 2785 aaKnown RBP9.56□□□□□ -0.88
ITGB1-202ENST00000396033 HSPB9Q9BQS6 159 aa9.56□□□□□ -0.88
ITGB1-202ENST00000396033 IGHV1-69DA0A0B4J2H0 117 aa9.56□□□□□ -0.88
ITGB1-202ENST00000396033 A1L4Q6 167 aa9.56□□□□□ -0.88
ITGB1-202ENST00000396033 GNG7O60262 68 aa9.56□□□□□ -0.88
ITGB1-202ENST00000396033 IGHV1-69P01742 117 aa9.56□□□□□ -0.88
ITGB1-202ENST00000396033 ZNF329Q86UD4 541 aa9.56□□□□□ -0.88
ITGB1-202ENST00000396033 EGR2P11161 476 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-202ENST00000396033 RAB4BP61018 213 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 OR10G8Q8NGN5 311 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 THYN1Q9P016 225 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 CSMD1Q96PZ7 3565 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 A0A0U1RQK1 487 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 GP9P14770 177 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 MFAP4P55083 255 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 RANP62826 216 aaKnown RBP9.55□□□□□ -0.88
ITGB1-202ENST00000396033 BRD3OSQ6XYD6 125 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 SLC25A39Q9BZJ4 359 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-202ENST00000396033 TP53TG3Q9ULZ0 132 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 OR2J3O76001 311 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 TOMM40O96008 361 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 ECSCRQ19T08 205 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 Q56UQ5 140 aa9.55□□□□□ -0.88
ITGB1-202ENST00000396033 GGCTO75223 188 aaKnown RBP9.54□□□□□ -0.88
ITGB1-202ENST00000396033 FAM3BP58499 235 aaPredicted RBP9.54□□□□□ -0.88
ITGB1-202ENST00000396033 SRD5A3Q9H8P0 318 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 EPG5Q9HCE0 2579 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 PEX7O00628 323 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 NBEAP1P0C6P0 100 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 SRSF1Q07955 248 aaKnown RBP eCLIP9.54□□□□□ -0.88
ITGB1-202ENST00000396033 OR5I1Q13606 314 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 TMUB1Q9BVT8 246 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 C21orf62Q9NYP8 219 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 FAM208BQ5VWN6 2430 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 TRAV30A0A087WSZ9 112 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 NDUFB8O95169 186 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 IL4P05112 153 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 MSMBP08118 114 aa9.54□□□□□ -0.88
ITGB1-202ENST00000396033 CNN1P51911 297 aaKnown RBP9.54□□□□□ -0.88
ITGB1-202ENST00000396033 SH2D7A6NKC9 451 aaPredicted RBP9.53□□□□□ -0.88
ITGB1-202ENST00000396033 H3BTX0 84 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 ATP6V0E1O15342 81 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 ERVFC1-1P60608 527 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 UNQ5815/PRO19632Q6UWF5 114 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 SGMS2Q8NHU3 365 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 RNF125Q96EQ8 232 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 IGF2BP2-AS1Q96M15 143 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 IMMP2LQ96T52 175 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 MRPL27Q9P0M9 148 aaKnown RBP9.53□□□□□ -0.88
ITGB1-202ENST00000396033 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
ITGB1-202ENST00000396033 TFPI2P48307 235 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 GNG5P63218 68 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 C1orf194Q5T5A4 169 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 TMEM219Q86XT9 240 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 LRRK2Q5S007 2527 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 SLC25A5P05141 298 aaKnown RBP9.53□□□□□ -0.88
ITGB1-202ENST00000396033 IGHV4-38-2P0DP08 117 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 DSCR9P59020 149 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 ACTL10Q5JWF8 245 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 ZNF48Q96MX3 618 aaPredicted RBP9.53□□□□□ -0.88
ITGB1-202ENST00000396033 FBXL7Q9UJT9 491 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms