RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 LIME1Q9H400 295 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 ZFHX4Q86UP3 3567 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 IGHV2-5P01817 119 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 GNLYP22749 145 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 PAX8Q06710 450 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SRSF6Q13247 344 aaKnown RBP2.75□□□□□ -1.97
VPS13C-203ENST00000395896 CENPWQ5EE01 88 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 DYNLRB2Q8TF09 96 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 OTORQ9NRC9 128 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 CYTL1Q9NRR1 136 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 FBXL7Q9UJT9 491 aa2.75□□□□□ -1.97
VPS13C-203ENST00000395896 SCO1O75880 301 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 IGFBP2P18065 325 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 EGR1P18146 543 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 LSM4Q9Y4Z0 139 aaKnown RBP2.74□□□□□ -1.97
VPS13C-203ENST00000395896 PHLDA3Q9Y5J5 127 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 CELSR2Q9HCU4 2923 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 TRAV40A0A0B4J280 105 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 C22orf46C9J442 243 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 SCGB1D1O95968 90 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 CDKN1AP38936 164 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 VDAC2P45880 294 aaPredicted RBP2.74□□□□□ -1.97
VPS13C-203ENST00000395896 FAM201AQ5SY85 155 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 TOMM40O96008 361 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 PSG1P11464 419 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 SPANXN1Q5VSR9 72 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 LINC00477Q96M19 166 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM14CQ9P0S9 112 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 CRYBB3P26998 211 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 CLEC12BQ2HXU8 276 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 SYT8Q8NBV8 401 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 GFRA4Q9GZZ7 299 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 IGHV3-72A0A0B4J1Y9 119 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 TRAV41A0A0B4J266 112 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 RNASE2P10153 161 aaKnown RBP2.74□□□□□ -1.97
VPS13C-203ENST00000395896 CAMPP49913 170 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 RHOGP84095 191 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF705AQ6ZN79 300 aaPredicted RBP2.74□□□□□ -1.97
VPS13C-203ENST00000395896 CX3CL1P78423 397 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 SPATA31B1PQ5VZV4 182 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 RPRMLQ8N4K4 120 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 ST6GALNAC6Q969X2 333 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 C1QTNF4Q9BXJ3 329 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 A0A1B0GUS0 222 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM89A2RUT3 159 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM37Q8WXS4 190 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 PRORYQ9H606 182 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF705BP0CI00 300 aaPredicted RBP2.74□□□□□ -1.97
VPS13C-203ENST00000395896 C12orf57Q99622 126 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 FOLR2P14207 255 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 OR10AG1Q8NH19 301 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 KIR2DL4Q99706 377 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 PCP4L1A6NKN8 68 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 FAM159AQ6UWV7 190 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 MS4A10Q96PG2 267 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 MAP1LC3CQ9BXW4 147 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 SLC25A39Q9BZJ4 359 aaPredicted RBP2.74□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM191AQ9H0A3 160 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 SEPSECSQ9HD40 501 aaKnown RBP2.74□□□□□ -1.97
VPS13C-203ENST00000395896 DUSP14O95147 198 aaKnown RBP2.74□□□□□ -1.97
VPS13C-203ENST00000395896 C1QTNF9P0C862 333 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 ZNF134P52741 427 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 VAMP8Q9BV40 100 aa2.74□□□□□ -1.97
VPS13C-203ENST00000395896 GPR183P32249 361 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 PAX2Q02962 417 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 AJUBAQ96IF1 538 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 CDX1P47902 265 aaPredicted RBP2.73□□□□□ -1.97
VPS13C-203ENST00000395896 NDUFA6P56556 154 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 PLP1P60201 277 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 ERASQ7Z444 233 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 PACRGQ96M98 296 aaPredicted RBP2.73□□□□□ -1.97
VPS13C-203ENST00000395896 IGHV1-69DA0A0B4J2H0 117 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 IGHV1-69P01742 117 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 SELLP14151 372 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 CKS2P33552 79 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 LINC01551Q86U37 167 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 CBLN2Q8IUK8 224 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 DDB2Q92466 427 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 ISOC2Q96AB3 205 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 MGST2Q99735 147 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 ORMDL3Q8N138 153 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 NPBQ8NG41 125 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 EPDR1Q9UM22 224 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 OVOL1O14753 267 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 TMEM50AO95807 157 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 FAM231DQ6ZW35 169 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 IL36BQ9NZH7 164 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 TRBV7-9A0A0J9YWB2 115 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 HIGD1CA8MV81 97 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 K7EMI3 77 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 HIST1H1AQ02539 215 aaPredicted RBP2.73□□□□□ -1.97
VPS13C-203ENST00000395896 CLEC9AQ6UXN8 241 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 COPS9Q8WXC6 57 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 C11orf52Q96A22 123 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 H3BUX3 64 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 OR2J3O76001 311 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 C10orf91Q5T1B1 145 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 TSKUQ8WUA8 353 aa2.73□□□□□ -1.97
VPS13C-203ENST00000395896 ITLN2Q8WWU7 325 aaPredicted RBP2.73□□□□□ -1.97
VPS13C-203ENST00000395896 NPIPB6E9PJ23 425 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms