RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 MED6O75586 246 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 NKX2-1P43699 371 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-203ENST00000395453 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 C2CD4CQ8TF44 421 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 PBDC1Q9BVG4 233 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 CLEC5AQ9NY25 188 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 TBC1D24Q9ULP9 559 aa9.77□□□□□ -0.85
SCAF11-203ENST00000395453 ABCA13Q86UQ4 5058 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 CCDC160A6NGH7 325 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 SYNGR2O43760 224 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 FABP1P07148 127 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 IAPPP10997 89 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 HLA-DRB4P13762 266 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 UBE2MP61081 183 aaKnown RBP9.76□□□□□ -0.85
SCAF11-203ENST00000395453 NUTF2P61970 127 aaKnown RBP9.76□□□□□ -0.85
SCAF11-203ENST00000395453 CENPSQ8N2Z9 138 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 CIB3Q96Q77 187 aaPredicted RBP9.76□□□□□ -0.85
SCAF11-203ENST00000395453 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 WDR12Q9GZL7 423 aaKnown RBP9.76□□□□□ -0.85
SCAF11-203ENST00000395453 SRRQ9GZT4 340 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 HLA-DRB4X5D2U9 266 aa9.76□□□□□ -0.85
SCAF11-203ENST00000395453 SOCS3O14543 225 aa9.75□□□□□ -0.85
SCAF11-203ENST00000395453 HLA-DMBP28068 263 aa9.75□□□□□ -0.85
SCAF11-203ENST00000395453 RPP30P78346 268 aaKnown RBP9.75□□□□□ -0.85
SCAF11-203ENST00000395453 GGNBP1Q5YKI7 109 aa9.75□□□□□ -0.85
SCAF11-203ENST00000395453 CLUHP3Q96NS8 147 aa9.75□□□□□ -0.85
SCAF11-203ENST00000395453 MAGT1Q9H0U3 335 aa9.75□□□□□ -0.85
SCAF11-203ENST00000395453 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
SCAF11-203ENST00000395453 A0A1B0GVY2 172 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 WRBO00258 174 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 CFDP00746 253 aaPredicted RBP9.74□□□□□ -0.85
SCAF11-203ENST00000395453 HOXB5P09067 269 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 PSMB3P49720 205 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 LYZP61626 148 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 ID3Q02535 119 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 OR2F1Q13607 317 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 BAK1Q16611 211 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 SPANXN2Q5MJ10 180 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 GDF5OSQ5U4N7 250 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 SAV1Q9H4B6 383 aaPredicted RBP9.74□□□□□ -0.85
SCAF11-203ENST00000395453 XCL2Q9UBD3 114 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
SCAF11-203ENST00000395453 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 NAP1L6A6NFF2 107 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 NDUFB6O95139 128 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 ID1P41134 155 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 ZNF705AQ6ZN79 300 aaPredicted RBP9.73□□□□□ -0.85
SCAF11-203ENST00000395453 FOXI2Q6ZQN5 318 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 Q6ZTC4 211 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 C17orf77Q96MU5 243 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 NEU1Q99519 415 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 SLC45A2Q9UMX9 530 aa9.73□□□□□ -0.85
SCAF11-203ENST00000395453 DNAH2Q9P225 4427 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 TRAV10A0A0B4J240 114 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 ZNF705FA8MVS1 300 aaPredicted RBP9.72□□□□□ -0.85
SCAF11-203ENST00000395453 IGLL5B9A064 214 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 ISLRO14498 428 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 ZNF705DP0CH99 300 aaPredicted RBP9.72□□□□□ -0.85
SCAF11-203ENST00000395453 ZNF705BP0CI00 300 aaPredicted RBP9.72□□□□□ -0.85
SCAF11-203ENST00000395453 DEFB1P60022 68 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 SPANXN5Q5MJ07 72 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 SPATA31B1PQ5VZV4 182 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 TMEM182Q6ZP80 229 aaPredicted RBP9.72□□□□□ -0.85
SCAF11-203ENST00000395453 OR8I2Q8N0Y5 310 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 SDHCQ99643 169 aaPredicted RBP9.72□□□□□ -0.85
SCAF11-203ENST00000395453 PAIP2BQ9ULR5 123 aaKnown RBP9.72□□□□□ -0.85
SCAF11-203ENST00000395453 CELA1Q9UNI1 258 aa9.72□□□□□ -0.85
SCAF11-203ENST00000395453 ZNF98A6NK75 572 aa9.71□□□□□ -0.86
SCAF11-203ENST00000395453 ADAP1O75689 374 aa9.71□□□□□ -0.86
SCAF11-203ENST00000395453 PAX9P55771 341 aa9.71□□□□□ -0.86
SCAF11-203ENST00000395453 ZNF709Q8N972 641 aa9.71□□□□□ -0.86
SCAF11-203ENST00000395453 LINC00052Q96N35 136 aa9.71□□□□□ -0.86
SCAF11-203ENST00000395453 FLVCR2Q9UPI3 526 aa9.71□□□□□ -0.86
SCAF11-203ENST00000395453 STRAPQ9Y3F4 350 aaKnown RBP9.71□□□□□ -0.86
SCAF11-203ENST00000395453 SMIM9A6NGZ8 99 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 PMS2P5A8MQ11 134 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 MEOX2P50222 304 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 POLR2GP62487 172 aaKnown RBP eCLIP9.7□□□□□ -0.86
SCAF11-203ENST00000395453 SAMD13Q5VXD3 122 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 GSG1LQ6UXU4 331 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 TMEM144Q7Z5S9 345 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 BPIFCQ8NFQ6 507 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 OR4D5Q8NGN0 318 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 PPP1R14BQ96C90 147 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 RNF126Q9BV68 326 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 KRTAP4-5Q9BYR2 181 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 SLC25A32Q9H2D1 315 aa9.7□□□□□ -0.86
SCAF11-203ENST00000395453 A0A0J9YX75 114 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 A8MTW9 85 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 H3BP45 60 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 IGKV3-20P01619 116 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 OR4E1P0C645 316 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 GATA2P23769 480 aaPredicted RBP9.69□□□□□ -0.86
SCAF11-203ENST00000395453 BTCP35070 178 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 GALR1P47211 349 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 FAM78BQ5VT40 261 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 TRIQKQ629K1 86 aa9.69□□□□□ -0.86
SCAF11-203ENST00000395453 COQ8AQ8NI60 647 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms