RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 TMA7Q9Y2S6 64 aaKnown RBP6.38□□□□□ -1.39
ATG4A-205ENST00000394892 hCG_2014768A0A024R1R8 64 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 F6UB75 175 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 SPP1P10451 314 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 IL7P13232 177 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 HLA-DRB4P13762 266 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 TCTAP57738 103 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 UBE2MP61081 183 aaKnown RBP6.37□□□□□ -1.39
ATG4A-205ENST00000394892 ARL16Q0P5N6 197 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 C4orf46Q504U0 113 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 SPANXN2Q5MJ10 180 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 MORN3Q6PF18 240 aaPredicted RBP6.37□□□□□ -1.39
ATG4A-205ENST00000394892 ZNF709Q8N972 641 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 NARS2Q96I59 477 aaKnown RBP6.37□□□□□ -1.39
ATG4A-205ENST00000394892 SLC25A32Q9H2D1 315 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 XCL2Q9UBD3 114 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 APLNQ9ULZ1 77 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 HLA-DRB4X5D2U9 266 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 DNAH17Q9UFH2 4485 aa6.37□□□□□ -1.39
ATG4A-205ENST00000394892 FAT2Q9NYQ8 4349 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 HERC2O95714 4834 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 TRAV8-2A0A0B4J237 113 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 SNRPGP15A8MWD9 76 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 SCGB2A1O75556 95 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 OR4E1P0C645 316 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 HLA-DMBP28068 263 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 NKX2-1P43699 371 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-205ENST00000394892 AP2S1P53680 142 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-205ENST00000394892 FXYD7P58549 80 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 C12orf74Q32Q52 190 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 SPANXN5Q5MJ07 72 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 IGFL4Q6B9Z1 124 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 Q6ZTC4 211 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 ACOT7LQ6ZUV0 252 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 ZNF767PQ75MW2 155 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 PAIP2BQ9ULR5 123 aaKnown RBP6.36□□□□□ -1.39
ATG4A-205ENST00000394892 RCL1Q9Y2P8 373 aaKnown RBP6.36□□□□□ -1.39
ATG4A-205ENST00000394892 HECTD4Q9Y4D8 3996 aa6.36□□□□□ -1.39
ATG4A-205ENST00000394892 NAP1L6A6NFF2 107 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 ZNF98A6NK75 572 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 A8MTW9 85 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 ZNF705FA8MVS1 300 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-205ENST00000394892 IGKV3-20P01619 116 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 ZNF705DP0CH99 300 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-205ENST00000394892 ZNF705BP0CI00 300 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-205ENST00000394892 PRB4P10163 310 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-205ENST00000394892 MIFP14174 115 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 RAB11AP62491 216 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 C1orf194Q5T5A4 169 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 AMTNQ6UX39 209 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 TMEM14EPQ6UXP3 125 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 PATE2Q6UY27 113 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 ZNF705AQ6ZN79 300 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-205ENST00000394892 C1orf158Q8N1D5 194 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 C2CD4CQ8TF44 421 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 LINC00052Q96N35 136 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 CIB3Q96Q77 187 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-205ENST00000394892 SLC35B3Q9H1N7 401 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 HRH4Q9H3N8 390 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 SAV1Q9H4B6 383 aaPredicted RBP6.35□□□□□ -1.39
ATG4A-205ENST00000394892 C11orf1Q9H5F2 150 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 TBC1D24Q9ULP9 559 aa6.35□□□□□ -1.39
ATG4A-205ENST00000394892 A0A0J9YX75 114 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 CCSO14618 274 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 SSSCA1O60232 199 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 MED6O75586 246 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 PRM2P04554 102 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 ORM2P19652 201 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 PSMB3P49720 205 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 SNRPD3P62318 126 aaKnown RBP6.34□□□□□ -1.39
ATG4A-205ENST00000394892 TMEM41BQ5BJD5 291 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 FAM78BQ5VT40 261 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 TRIQKQ629K1 86 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 FOXI2Q6ZQN5 318 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 TMEM144Q7Z5S9 345 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 ZBTB8BQ8NAP8 495 aaPredicted RBP6.34□□□□□ -1.39
ATG4A-205ENST00000394892 MITD1Q8WV92 249 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 SMIM8Q96KF7 97 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 RSG1Q9BU20 258 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 PSENENQ9NZ42 101 aa6.34□□□□□ -1.39
ATG4A-205ENST00000394892 STRAPQ9Y3F4 350 aaKnown RBP6.34□□□□□ -1.39
ATG4A-205ENST00000394892 IGLL5B9A064 214 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 H3BRN7 92 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 MRPS12O15235 138 aaKnown RBP6.33□□□□□ -1.4
ATG4A-205ENST00000394892 MBPP02686 304 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-205ENST00000394892 METTL15P1P0C7V9 234 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 PLP1P60201 277 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 RRAS2P62070 204 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-205ENST00000394892 IAH1Q2TAA2 248 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-205ENST00000394892 CYP2G1PQ6ZSU1 146 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 LINC00336Q6ZUF6 198 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 OR8I2Q8N0Y5 310 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 RNF182Q8N6D2 247 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 CLUHP3Q96NS8 147 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 SEC22CQ9BRL7 303 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 SHANK2-AS3Q9BTD1 123 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 SLC25A22Q9H936 323 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 DOK5Q9P104 306 aa6.33□□□□□ -1.4
ATG4A-205ENST00000394892 SLC45A2Q9UMX9 530 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms