RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 SRSF1Q07955 248 aaKnown RBP eCLIP11.21□□□□□ -0.61
PPP3CA-202ENST00000394853 CDX1P47902 265 aaPredicted RBP11.21□□□□□ -0.61
PPP3CA-202ENST00000394853 IGHV2-70DA0A0C4DH43 119 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 PMCHP20382 165 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 SAA4P35542 130 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 ZNF137PP52743 207 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 MIR17HGQ75NE6 70 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 TMEM219Q86XT9 240 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 C15orf54Q8N8G6 183 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 C8orf31Q8N9H6 132 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 P2RX4Q99571 388 aa11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 FNDC4Q9H6D8 234 aaPredicted RBP11.21□□□□□ -0.62
PPP3CA-202ENST00000394853 F8P00451 2351 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 CELSR2Q9HCU4 2923 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 C2orf83Q53S99 150 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 NECAP1Q8NC96 275 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 OR1N2Q8NGR9 330 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 NPIPB3Q92617 1050 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 PARLQ9H300 379 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 CD69Q07108 199 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 DERL1Q9BUN8 251 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 MRPL36Q9P0J6 103 aaKnown RBP11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 ZNF705FA8MVS1 300 aaPredicted RBP11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 M0R1W7 72 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 ZNF705DP0CH99 300 aaPredicted RBP11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 ZNF705BP0CI00 300 aaPredicted RBP11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 PSG5Q15238 335 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 OXLD1Q5BKU9 147 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 SLC35E1Q96K37 410 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 GNB4Q9HAV0 340 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 PITPNC1Q9UKF7 332 aa11.2□□□□□ -0.62
PPP3CA-202ENST00000394853 K7EP13 123 aa11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 LGALS7P47929 136 aa11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 PLP1P60201 277 aa11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 FAM71F2Q6NXP2 309 aa11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 FAM103A1Q9BTL3 118 aaKnown RBP11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 HAX1O00165 279 aa11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 ZNF90Q03938 601 aa11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 MANBALQ9NQG1 85 aa11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 SIGLEC9Q9Y336 463 aa11.19□□□□□ -0.62
PPP3CA-202ENST00000394853 NPFFO15130 113 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 NDUFB4O95168 129 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 RPL27AP46776 148 aaKnown RBP11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 SRSF2Q01130 221 aaKnown RBP11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 PRSS8Q16651 343 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 MRGPRG-AS1Q2M3A8 158 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 RNASEKQ6P5S7 137 aaKnown RBP11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 SDF2L1Q9HCN8 221 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 MT-ND4LP03901 98 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 LINC00869P0C866 280 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 RAB5AP20339 215 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 NPPCP23582 126 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 FBLN7Q53RD9 439 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 PRR31Q5SQ13 230 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 PPP1R27Q86WC6 154 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 PSMG3-AS1Q96PY0 264 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 FAM110AQ9BQ89 295 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 RND2P52198 227 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 LMO4P61968 165 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 RHOBP62745 196 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 SLC45A2Q9UMX9 530 aa11.18□□□□□ -0.62
PPP3CA-202ENST00000394853 MOSP00540 346 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 TMEM241Q24JQ0 296 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 LY6G5BQ8NDX9 201 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 C1orf43Q9BWL3 253 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 CXCL1P09341 107 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 UBE2V1Q13404 147 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 C5orf47Q569G3 176 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 MMD2Q8IY49 270 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 Q8WTZ3 238 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 H3BUX3 64 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 CXorf1O96002 111 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 EDN2P20800 178 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 ATP5IP56385 69 aaPredicted RBP11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 PRR20EP86478 221 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 PRR20CP86479 221 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 PRR20DP86480 221 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 PRR20BP86481 221 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 PRR20AP86496 221 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 C8orf46Q8TAG6 207 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 ITPR3Q14573 2671 aa11.17□□□□□ -0.62
PPP3CA-202ENST00000394853 GCHFRP30047 84 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 OR4A5Q8NH83 315 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 SLC25A33Q9BSK2 321 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 KCNIP2Q9NS61 270 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 YTHDF2Q9Y5A9 579 aaKnown RBP11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 OVOL3O00110 214 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 MORN5Q5VZ52 161 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 Q6ZVH6 145 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 TEX29Q8N6K0 151 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 SH2D7A6NKC9 451 aaPredicted RBP11.16□□□□□ -0.62
PPP3CA-202ENST00000394853 MFAP2P55001 183 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms