RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 AJUBAQ96IF1 538 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 DNAJC4Q9NNZ3 241 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 CDC42EP3Q9UKI2 254 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 MRPS16Q9Y3D3 137 aaKnown RBP5.53□□□□□ -1.52
RTN4-205ENST00000394609 ABCA2Q9BZC7 2435 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 APCP25054 2843 aa5.53□□□□□ -1.52
RTN4-205ENST00000394609 PLXNB1O43157 2135 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 CELSR1Q9NYQ6 3014 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 C17orf112F2Z3M2 114 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 MOSP00540 346 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 MSMBP08118 114 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 MDKP21741 143 aaPredicted RBP5.52□□□□□ -1.53
RTN4-205ENST00000394609 DSCR9P59020 149 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 WT1-ASQ06250 92 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 FAM120AOSQ5T036 256 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 MINOS1Q5TGZ0 78 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 RUSC1-AS1Q66K80 236 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 CYB5R2Q6BCY4 276 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 CCDC144NLQ6NUI1 221 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 Q6ZWC4 215 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 PPP1R27Q86WC6 154 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 MMD2Q8IY49 270 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 RPUSD4Q96CM3 377 aaKnown RBP5.52□□□□□ -1.53
RTN4-205ENST00000394609 ELOVL1Q9BW60 279 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 VSIRQ9H7M9 311 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 HIF1ANQ9NWT6 349 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 ZNF586Q9NXT0 402 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 MINOS1-NBL1R4GNA1 71 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 ARL2-SNX15V9GYD0 113 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 CCDC168Q8NDH2 2452 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 TET2Q6N021 2002 aaPredicted RBP5.52□□□□□ -1.53
RTN4-205ENST00000394609 ABCA1O95477 2261 aa5.52□□□□□ -1.53
RTN4-205ENST00000394609 A0A0U1RQK1 487 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 ZNF320A2RRD8 509 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 NCBP2LA6PVI3 153 aaKnown RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 PRSS46E5RG02 174 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 NPFFO15130 113 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 MPDU1O75352 247 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 IGHV3-48P01763 117 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 RNASE2P10153 161 aaKnown RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 AREGP15514 252 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 CRISP2P16562 243 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 COMPP49747 757 aaPredicted RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 FGF8P55075 233 aaPredicted RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 ERHP84090 104 aaKnown RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 DEFB113Q30KQ7 82 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 OR10J3Q5JRS4 329 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 BRD3OSQ6XYD6 125 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 C19orf35Q6ZS72 473 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 NECAP1Q8NC96 275 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 OR4F5Q8NH21 305 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 SFRP2Q96HF1 295 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 OR4F4Q96R69 305 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 GNB1LQ9BYB4 327 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 GCN1Q92616 2671 aaKnown RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 ZANQ9Y493 2812 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 TRAV40A0A0B4J280 105 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 MDFIC2A0A1B0GVS7 189 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 IGLC7A0M8Q6 106 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 OOSP1A8MZH6 123 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 B4DSR2 109 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 C11orf94C9JXX5 98 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 NBR2O15453 112 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 CNIH1O95406 144 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 IGHV4-38-2P0DP08 117 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 SLC25A16P16260 332 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 RPL27AP46776 148 aaKnown RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 SSBP2P81877 361 aaPredicted RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 UBE2V1Q13404 147 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 FAM78BQ5VT40 261 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 WDR73Q6P4I2 378 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 TMEM256Q8N2U0 113 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 ZNF709Q8N972 641 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 OR10G9Q8NGN4 311 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 OR10G7Q8NGN6 311 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 RNF5Q99942 180 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 NPCDR1Q9BY65 106 aa5.51□□□□□ -1.53
RTN4-205ENST00000394609 TBL2Q9Y4P3 447 aaKnown RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 SOX21Q9Y651 276 aaPredicted RBP5.51□□□□□ -1.53
RTN4-205ENST00000394609 FASNP49327 2511 aaKnown RBP5.5□□□□□ -1.53
RTN4-205ENST00000394609 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.533e-9■■■■■ 96.9
RTN4-205ENST00000394609 IGHV1-69DA0A0B4J2H0 117 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 C9JCJ5 164 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 IGHV1-69P01742 117 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 OR10J4P0C629 311 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 DEFA4P12838 97 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 UBE2G2P60604 165 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 PMCHL1Q16048 86 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 C5orf64Q2M2E5 130 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 C2orf83Q53S99 150 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 GCSAMLQ5JQS6 135 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 FFAR4Q5NUL3 377 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 Q5PR19 223 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 ACSM6Q6P461 480 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 PET117Q6UWS5 81 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 SIGLECL1Q8N7X8 197 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 ZNF738Q8NE65 137 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 SGMS2Q8NHU3 365 aa5.5□□□□□ -1.53
RTN4-205ENST00000394609 SSMEM1Q8WWF3 244 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms