RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 RPL27AP46776 148 aaKnown RBP10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 PMCHL1Q16048 86 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 CYB5R2Q6BCY4 276 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 OR1L4Q8NGR5 311 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 ZNF331Q9NQX6 463 aaPredicted RBP10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 TRBV9A0A0B4J1U6 114 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 INS-IGF2F8WCM5 200 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 ATP5IP56385 69 aaPredicted RBP10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 BPIFB3P59826 476 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 WDR73Q6P4I2 378 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 TP73-AS1Q9UF72 201 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 SIGLEC9Q9Y336 463 aa10.73□□□□□ -0.69
GTF2F1-201ENST00000394456 CFAP46Q8IYW2 2715 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 ZNF324O75467 553 aaPredicted RBP10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 CRYGCP07315 174 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 NBEAP1P0C6P0 100 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 TFPI2P48307 235 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 ZNF137PP52743 207 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 SUB1P53999 127 aaKnown RBP eCLIP10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 BCL6BQ8N143 479 aaPredicted RBP10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 EXOC3-AS1Q8N2X6 119 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 OR4A5Q8NH83 315 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 C17orf77Q96MU5 243 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 IGHV1-3A0A0C4DH29 117 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 FOXA3P55318 350 aaPredicted RBP10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 LYZP61626 148 aa10.72□□□□□ -0.69
GTF2F1-201ENST00000394456 IGLV1-47P01700 117 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 HLA-DQA1P01909 254 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 MT-ND6P03923 174 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 CRYGBP07316 175 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 GP9P14770 177 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 SSTP61278 116 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 UBE2G1P62253 170 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 KLF17Q5JT82 389 aaPredicted RBP10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 SPATA12Q7Z6I5 190 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 OR2D3Q8NGH3 330 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 GTSF1Q8WW33 167 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 MIEN1Q9BRT3 115 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 ZNF586Q9NXT0 402 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 INSIG2Q9Y5U4 225 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 ZFHX3Q15911 3703 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 PSG1P11464 419 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 OR10J3Q5JRS4 329 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 C20orf144Q9BQM9 153 aa10.71□□□□□ -0.69
GTF2F1-201ENST00000394456 CIARTQ8N365 385 aaPredicted RBP10.71□□□□□ -0.7
GTF2F1-201ENST00000394456 PERPQ96FX8 193 aa10.71□□□□□ -0.7
GTF2F1-201ENST00000394456 GRAMD2BQ96HH9 432 aa10.71□□□□□ -0.7
GTF2F1-201ENST00000394456 URB1-AS1Q96HZ7 61 aa10.71□□□□□ -0.7
GTF2F1-201ENST00000394456 RNF2Q99496 336 aa10.71□□□□□ -0.7
GTF2F1-201ENST00000394456 Q9H3A6 140 aa10.71□□□□□ -0.7
GTF2F1-201ENST00000394456 PRORYQ9H606 182 aa10.71□□□□□ -0.7
GTF2F1-201ENST00000394456 CACNA1BQ00975 2339 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 BUB1B-PAK6H3BSN5 160 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 UQCRFS1P47985 274 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 TMEM183BQ1AE95 376 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 PGLYRP4Q96LB8 373 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 CLEC7AQ9BXN2 247 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 HYPMO75409 117 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 MC5RP33032 325 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 KLRD1Q13241 179 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 SPATA45Q537H7 98 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 LBHQ53QV2 105 aaPredicted RBP10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 EBLN2Q6P2I7 272 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 PPP1R27Q86WC6 154 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 CLEC5AQ9NY25 188 aa10.7□□□□□ -0.7
GTF2F1-201ENST00000394456 ACACBO00763 2458 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 RBP4P02753 201 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 ZNF25P17030 456 aaPredicted RBP10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 HILPDAQ9Y5L2 63 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 MAP1AP78559 2803 aaPredicted RBP10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 PPIAL4CA0A0B4J2A2 164 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 A0A1W2PPR1 153 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 CTRLP40313 264 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 LGALS7P47929 136 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 FAM71F2Q6NXP2 309 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 LINC00173Q6ZV60 143 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 FAM231DQ6ZW35 169 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 C8orf31Q8N9H6 132 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 TEX45Q8NA69 505 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 TMEM116Q8NCL8 245 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 SRSF12Q8WXF0 261 aaKnown RBP10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 TRGV9Q99603 122 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 ALKBH7Q9BT30 221 aaPredicted RBP10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 MLST8Q9BVC4 326 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 ONECUT1Q9UBC0 465 aa10.69□□□□□ -0.7
GTF2F1-201ENST00000394456 ZFYVE26Q68DK2 2539 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 ZNF785A8K8V0 405 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 RPL19P84098 196 aaKnown RBP10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 MMDQ15546 238 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 RAB1BQ9H0U4 201 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 F11RQ9Y624 299 aaKnown RBP10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 IGSF10Q6WRI0 2623 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 TIMM23O14925 209 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 TCRAP04437 139 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 IGLC1P0CG04 106 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 ZNF138P52744 262 aa10.68□□□□□ -0.7
GTF2F1-201ENST00000394456 PLGLAQ15195 96 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms