RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 OR5AU1Q8NGC0 362 aa15.72■□□□□ 0.11
HDDC3-202ENST00000394272 SUN5Q8TC36 379 aa15.72■□□□□ 0.11
HDDC3-202ENST00000394272 SLC35B3Q9H1N7 401 aa15.72■□□□□ 0.11
HDDC3-202ENST00000394272 SERTAD4Q9NUC0 356 aa15.72■□□□□ 0.11
HDDC3-202ENST00000394272 OR7C2O60412 319 aa15.71■□□□□ 0.11
HDDC3-202ENST00000394272 PAGE4O60829 102 aa15.71■□□□□ 0.11
HDDC3-202ENST00000394272 SRP19P09132 144 aaKnown RBP15.71■□□□□ 0.11
HDDC3-202ENST00000394272 SEC11CQ9BY50 192 aa15.71■□□□□ 0.11
HDDC3-202ENST00000394272 SLC25A39Q9BZJ4 359 aaPredicted RBP15.71■□□□□ 0.11
HDDC3-202ENST00000394272 PUS1Q9Y606 427 aaKnown RBP eCLIP15.71■□□□□ 0.11
HDDC3-202ENST00000394272 A0A0G2JLM5 398 aa15.71■□□□□ 0.11
HDDC3-202ENST00000394272 MEF2BQ02080 365 aaPredicted RBP15.71■□□□□ 0.11
HDDC3-202ENST00000394272 TMEM167BQ9NRX6 74 aa15.71■□□□□ 0.11
HDDC3-202ENST00000394272 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.7■□□□□ 0.1
HDDC3-202ENST00000394272 F8W036 122 aa15.7■□□□□ 0.1
HDDC3-202ENST00000394272 CD81P60033 236 aa15.7■□□□□ 0.1
HDDC3-202ENST00000394272 SLC35B1P78383 322 aa15.7■□□□□ 0.1
HDDC3-202ENST00000394272 RNASE1P07998 156 aaKnown RBP15.69■□□□□ 0.1
HDDC3-202ENST00000394272 KIAA0141Q14154 515 aaPredicted RBP15.69■□□□□ 0.1
HDDC3-202ENST00000394272 ZNF343Q6P1L6 599 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 TEX38Q6PEX7 206 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 Q6ZSV7 163 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 ZNF418Q8TF45 676 aaPredicted RBP15.69■□□□□ 0.1
HDDC3-202ENST00000394272 ZFAND3Q9H8U3 227 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 CARHSP1Q9Y2V2 147 aaKnown RBP15.69■□□□□ 0.1
HDDC3-202ENST00000394272 NF1P21359 2839 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 H3BRN7 92 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 NDUFS6O75380 124 aaKnown RBP15.69■□□□□ 0.1
HDDC3-202ENST00000394272 HILS1P60008 231 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 UBE2G2P60604 165 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 FOXE3Q13461 319 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 STXBP6Q8NFX7 210 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 SHANK2-AS3Q9BTD1 123 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 PAXXQ9BUH6 204 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 OR51M1Q9H341 326 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 GNB4Q9HAV0 340 aa15.69■□□□□ 0.1
HDDC3-202ENST00000394272 NSD1Q96L73 2696 aaPredicted RBP15.69■□□□□ 0.1
HDDC3-202ENST00000394272 IGHV3-35A0A0C4DH35 117 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 PPP5D1E7EU14 171 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 TRBV12-3P01733 135 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 IGHV3-11P01762 117 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 ELANEP08246 267 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 OR10J4P0C629 311 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 PYYP10082 97 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 RPL15P61313 204 aaKnown RBP15.68■□□□□ 0.1
HDDC3-202ENST00000394272 LEMD1Q68G75 181 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 TOMM20LQ6UXN7 152 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 Q71RC1 249 aaPredicted RBP15.68■□□□□ 0.1
HDDC3-202ENST00000394272 MYOZ3Q8TDC0 251 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 ARL2-SNX15V9GYD0 113 aa15.68■□□□□ 0.1
HDDC3-202ENST00000394272 FAM74A7A6NL05 159 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 UBE2L3P68036 154 aaKnown RBP15.67■□□□□ 0.1
HDDC3-202ENST00000394272 RELQ04864 619 aaPredicted RBP15.67■□□□□ 0.1
HDDC3-202ENST00000394272 RNF152Q8N8N0 203 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 CYB561D1Q8N8Q1 229 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 OR4X2Q8NGF9 303 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 FXYD5Q96DB9 178 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 YTHDF2Q9Y5A9 579 aaKnown RBP15.67■□□□□ 0.1
HDDC3-202ENST00000394272 INAFM1C9JVW0 142 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 C11orf94C9JXX5 98 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 APOC3P02656 99 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 ARL3P36405 182 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 ATP5G3P48201 142 aa15.67■□□□□ 0.1
HDDC3-202ENST00000394272 BMPR1BO00238 502 aa15.66■□□□□ 0.1
HDDC3-202ENST00000394272 GP9P14770 177 aa15.66■□□□□ 0.1
HDDC3-202ENST00000394272 TXNDC17Q9BRA2 123 aa15.66■□□□□ 0.1
HDDC3-202ENST00000394272 RPLP1P05386 114 aaKnown RBP15.65■□□□□ 0.1
HDDC3-202ENST00000394272 CST9LP1Q5W188 147 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 S100A7AQ86SG5 101 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 OR4F5Q8NH21 305 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 OR4F4Q96R69 305 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 TMEM14CQ9P0S9 112 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 ZNF98A6NK75 572 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 SOHLH1Q5JUK2 328 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 FAM90A2PQ658T7 463 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 RABAC1Q9UI14 185 aa15.65■□□□□ 0.1
HDDC3-202ENST00000394272 FN1P02751 2386 aaKnown RBP15.64■□□□□ 0.09
HDDC3-202ENST00000394272 TMEM250H0YL14 139 aa15.64■□□□□ 0.09
HDDC3-202ENST00000394272 GUCA2BQ16661 112 aa15.64■□□□□ 0.09
HDDC3-202ENST00000394272 IGHV3OR16-8A0A075B7F1 116 aa15.63■□□□□ 0.09
HDDC3-202ENST00000394272 A0A1W2PRE2 83 aa15.63■□□□□ 0.09
HDDC3-202ENST00000394272 CLPSL1A2RUU4 121 aa15.63■□□□□ 0.09
HDDC3-202ENST00000394272 FAM209BQ5JX69 171 aa15.63■□□□□ 0.09
HDDC3-202ENST00000394272 MRPS12O15235 138 aaKnown RBP15.63■□□□□ 0.09
HDDC3-202ENST00000394272 CEBPGP53567 150 aa15.63■□□□□ 0.09
HDDC3-202ENST00000394272 KLHDC1Q8N7A1 406 aa15.63■□□□□ 0.09
HDDC3-202ENST00000394272 PDE6DO43924 150 aa15.62■□□□□ 0.09
HDDC3-202ENST00000394272 CRYBA1P05813 215 aa15.62■□□□□ 0.09
HDDC3-202ENST00000394272 CCDC28AQ8IWP9 274 aa15.62■□□□□ 0.09
HDDC3-202ENST00000394272 PEF1Q9UBV8 284 aaKnown RBP15.62■□□□□ 0.09
HDDC3-202ENST00000394272 F8P00451 2351 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 NDUFA4O00483 81 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 NPPCP23582 126 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 BPIFA4PQ86YQ2 179 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 SVBPQ8N300 66 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 UBE2E2Q96LR5 201 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 JMJD8Q96S16 334 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 SETXQ7Z333 2677 aaKnown RBP15.61■□□□□ 0.09
HDDC3-202ENST00000394272 GGTLC3B5MD39 225 aa15.61■□□□□ 0.09
HDDC3-202ENST00000394272 NBEAP1P0C6P0 100 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms